RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ZDHHC11BP0C7U3 371 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 CSTF1Q05048 431 aaKnown RBP17.05■□□□□ 0.32
COL7A1-203ENST00000459756 PAK1Q13153 545 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 CCINQ13939 588 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 EML3Q32P44 896 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL7A1-203ENST00000459756 TATDN2Q93075 761 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 HEXIM2Q96MH2 286 aaKnown RBP17.05■□□□□ 0.32
COL7A1-203ENST00000459756 ARID3AQ99856 593 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 PNPLA8Q9NP80 782 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 CHORDC1Q9UHD1 332 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-203ENST00000459756 CPQQ9Y646 472 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 WNT6Q9Y6F9 365 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 R4GN57 208 aa17.05■□□□□ 0.32
COL7A1-203ENST00000459756 FANCMQ8IYD8 2048 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 TRDMT1O14717 391 aaKnown RBP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 PMM2O15305 246 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 GNA14O95837 355 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 MBL2P11226 248 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 FMO5P49326 533 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 CCR3P51677 355 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 YWHAEP62258 255 aaKnown RBP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 ZXDBP98169 803 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 GRSF1Q12849 480 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 NR1H3Q13133 447 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 ZNF394Q53GI3 561 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 SPEM1Q8N4L4 309 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 TMEM176AQ96HP8 235 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 FAM126AQ9BYI3 521 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 RBM12Q9NTZ6 932 aaKnown RBP17.04■□□□□ 0.32
COL7A1-203ENST00000459756 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 GMIPQ9P107 970 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
COL7A1-203ENST00000459756 HHLA1C9JL84 531 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 SLC9A3R1O14745 358 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-203ENST00000459756 COCHO43405 550 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 NFATC1O95644 943 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 GJA4P35212 333 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 RAD23BP54727 409 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 CETN1Q12798 172 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 CUL2Q13617 745 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 CAMK4Q16566 473 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 TMEM196Q5HYL7 178 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-203ENST00000459756 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 NELL1Q92832 810 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 CHFRQ96EP1 664 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 DUSP16Q9BY84 665 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 LINC00597Q9H2U6 94 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 TLR8Q9NR97 1041 aaKnown RBP17.03■□□□□ 0.32
COL7A1-203ENST00000459756 ZSCAN32Q9NX65 697 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 SCML2Q9UQR0 700 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 WDR87Q6ZQQ6 2873 aa17.03■□□□□ 0.32
COL7A1-203ENST00000459756 P4HA2O15460 535 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 FGFR1OPO95684 399 aaKnown RBP17.02■□□□□ 0.32
COL7A1-203ENST00000459756 TBXAS1P24557 533 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-203ENST00000459756 CXCL12P48061 93 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 NRLP54845 237 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 STX17P56962 302 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 GAS6Q14393 721 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 ARHGAP17Q68EM7 881 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 FSTL4Q6MZW2 842 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 ATRIPQ8WXE1 791 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 P2RY13Q9BPV8 354 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 CFAP97Q9P2B7 532 aa17.02■□□□□ 0.32
COL7A1-203ENST00000459756 E2F8A0AVK6 867 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 PAPSS2O95340 614 aaPredicted RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 LMNAP02545 664 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 TDGF1P13385 188 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 DRD1P21728 446 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 KIF11P52732 1056 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 MARSP56192 900 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 SLC8A3P57103 927 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 TSSK4Q6SA08 328 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 Q6ZS52 159 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 GPRIN1Q7Z2K8 1008 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 TRIM59Q8IWR1 403 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 ZBTB44Q8NCP5 570 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 ZFRQ96KR1 1074 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 NT5C1BQ96P26 610 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 UBXN6Q9BZV1 441 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 NACA2Q9H009 215 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 RWDD2AQ9UIY3 292 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 MYO16Q9Y6X6 1858 aa17.01■□□□□ 0.31
COL7A1-203ENST00000459756 RIF1Q5UIP0 2472 aaKnown RBP17.01■□□□□ 0.31
COL7A1-203ENST00000459756 FRYLO94915 3013 aa17■□□□□ 0.31
COL7A1-203ENST00000459756 CYP26A1O43174 497 aa17■□□□□ 0.31
COL7A1-203ENST00000459756 TLR5O60602 858 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms