RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HHLA1C9JL84 531 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 O00370 1275 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 XPO1O14980 1071 aaKnown RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 OAS1P00973 400 aaKnown RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 PDGFBP01127 241 aaPredicted RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 AOC1P19801 751 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 MIIPQ5JXC2 388 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 C11orf57Q6ZUT1 292 aaPredicted RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 PIGZQ86VD9 579 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 KAT5Q92993 513 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 EXOC4Q96A65 974 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 CDK5RAP1Q96SZ6 601 aaKnown RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 OSBPL6Q9BZF3 934 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 GMIPQ9P107 970 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 SIT1Q9Y3P8 196 aa17.03■□□□□ 0.32
CD28-203ENST00000458610 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
CD28-203ENST00000458610 C5orf42Q9H799 3197 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 PTPRDP23468 1912 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 RNF225M0QZC1 329 aaPredicted RBP17.02■□□□□ 0.32
CD28-203ENST00000458610 SLC9A3R1O14745 358 aaPredicted RBP17.02■□□□□ 0.32
CD28-203ENST00000458610 OLFM2O95897 454 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.32
CD28-203ENST00000458610 RALAP11233 206 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 COL9A1P20849 921 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 USP8P40818 1118 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 ZNF132P52740 706 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 PDE4CQ08493 712 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 NR1H3Q13133 447 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 MTF1Q14872 753 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 ITPRIPL2Q3MIP1 535 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 TPRG1Q6ZUI0 275 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 CCDC186Q7Z3E2 898 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 SH3RF2Q8TEC5 729 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 KCTD13Q8WZ19 329 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 LRRC3BQ96PB8 259 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 SLC22A12Q96S37 553 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.32
CD28-203ENST00000458610 HEBP1Q9NRV9 189 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 TAB2Q9NYJ8 693 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 DNAJC12Q9UKB3 198 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 CCL26Q9Y258 94 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 USP3Q9Y6I4 520 aa17.02■□□□□ 0.32
CD28-203ENST00000458610 ATP5C1P36542 298 aaKnown RBP17.01■□□□□ 0.31
CD28-203ENST00000458610 PLA2G4AP47712 749 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 IFNAR2P48551 515 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 BPIFB4P59827 614 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 PTK2Q05397 1052 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 KRT31Q15323 416 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 MEA1Q16626 185 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 ARHGAP44Q17R89 818 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 ANO6Q4KMQ2 910 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 RAB41Q5JT25 222 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 TTC30AQ86WT1 665 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 RALGPS2Q86X27 583 aaPredicted RBP17.01■□□□□ 0.31
CD28-203ENST00000458610 ZNF276Q8N554 614 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 RNF38Q9H0F5 515 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 IRF2BPLQ9H1B7 796 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 VPS16Q9H269 839 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 DUS2Q9NX74 493 aaKnown RBP17.01■□□□□ 0.31
CD28-203ENST00000458610 CLIC5Q9NZA1 410 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.01■□□□□ 0.31
CD28-203ENST00000458610 DAAM1Q9Y4D1 1078 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 PIAS3Q9Y6X2 628 aa17.01■□□□□ 0.31
CD28-203ENST00000458610 ARNTLO00327 626 aa17■□□□□ 0.31
CD28-203ENST00000458610 COCHO43405 550 aa17■□□□□ 0.31
CD28-203ENST00000458610 TLR5O60602 858 aa17■□□□□ 0.31
CD28-203ENST00000458610 CAVIN2O95810 425 aa17■□□□□ 0.31
CD28-203ENST00000458610 ZBED1O96006 694 aa17■□□□□ 0.31
CD28-203ENST00000458610 MAGEA9P43362 315 aa17■□□□□ 0.31
CD28-203ENST00000458610 TKTL1P51854 596 aa17■□□□□ 0.31
CD28-203ENST00000458610 USP4Q13107 963 aa17■□□□□ 0.31
CD28-203ENST00000458610 RUNX3Q13761 415 aa17■□□□□ 0.31
CD28-203ENST00000458610 UBXN2BQ14CS0 331 aa17■□□□□ 0.31
CD28-203ENST00000458610 ZNF77Q15935 545 aa17■□□□□ 0.31
CD28-203ENST00000458610 KLHDC10Q6PID8 442 aa17■□□□□ 0.31
CD28-203ENST00000458610 GPRIN1Q7Z2K8 1008 aa17■□□□□ 0.31
CD28-203ENST00000458610 SIX6OS1Q8N1H7 587 aa17■□□□□ 0.31
CD28-203ENST00000458610 CPA6Q8N4T0 437 aa17■□□□□ 0.31
CD28-203ENST00000458610 TTC16Q8NEE8 873 aa17■□□□□ 0.31
CD28-203ENST00000458610 FAM3CQ92520 227 aa17■□□□□ 0.31
CD28-203ENST00000458610 SHC3Q92529 594 aa17■□□□□ 0.31
CD28-203ENST00000458610 HSFY1Q96LI6 401 aa17■□□□□ 0.31
CD28-203ENST00000458610 CYLDQ9NQC7 956 aa17■□□□□ 0.31
CD28-203ENST00000458610 TBC1D14Q9P2M4 693 aa17■□□□□ 0.31
CD28-203ENST00000458610 LIMA1Q9UHB6 759 aaKnown RBP17■□□□□ 0.31
CD28-203ENST00000458610 NAGPAQ9UK23 515 aa17■□□□□ 0.31
CD28-203ENST00000458610 CPQQ9Y646 472 aa17■□□□□ 0.31
CD28-203ENST00000458610 LRRC10BA6NIK2 292 aa16.99■□□□□ 0.31
CD28-203ENST00000458610 FAM170BA6NMN3 283 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms