RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 GNG14A0A1W2PPG7 69 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 TRIM16LQ309B1 348 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 FIG4Q92562 907 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 TPD52L3Q96J77 140 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 TOMM70O94826 608 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 OASLQ15646 514 aaKnown RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 SCUBE1Q8IWY4 988 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 A0A087X0T9 212 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 F5H5T6 163 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 FAM228BP0C875 321 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 AGAP9Q5VTM2 703 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 ANKRD7Q92527 254 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 FBXO32Q969P5 355 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 C10orf88Q9H8K7 445 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 GOLGA8TH3BQL2 631 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 CAPN1P07384 714 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 SARSP49591 514 aaKnown RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 DDI2Q5TDH0 399 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 FAM131BQ86XD5 332 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 ROPN1BQ9BZX4 212 aaPredicted RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 ROPN1Q9HAT0 212 aaPredicted RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 MAN1C1Q9NR34 630 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 FAM86B2P0C5J1 330 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 SERPINB8P50452 374 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 CNTN1Q12860 1018 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 TRAPPC11Q7Z392 1133 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 ADGRF2Q8IZF7 708 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 EDEM1Q92611 657 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 PARK7Q99497 189 aaKnown RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 SOX13Q9UN79 622 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 FGFR1P11362 822 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 ATN1P54259 1190 aaPredicted RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 RD3Q7Z3Z2 195 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 KCTD14Q9BQ13 255 aaPredicted RBP20.29■□□□□ 0.84
SNX27-204ENST00000458013 APPL1Q9UKG1 709 aa20.29■□□□□ 0.84
SNX27-204ENST00000458013 CCNT2O60583 730 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 APOA4P06727 396 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 SCARA3Q6AZY7 606 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 GPRC5AQ8NFJ5 357 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 TRPC4APQ8TEL6 797 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 TMEM237Q96Q45 408 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 ALDH7A1P49419 539 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 PLCL1Q15111 1095 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 UTS2BQ765I0 119 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 TDRKHQ9Y2W6 561 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 FAM25AB3EWG3 89 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 FAM25CB3EWG5 89 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 FAM25GB3EWG6 89 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 SHROOM1Q2M3G4 852 aaPredicted RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 PAFAH2Q99487 392 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 RPS6KB2Q9UBS0 482 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 BCORL1Q5H9F3 1711 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 VPS26AO75436 327 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 SCTRP47872 440 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 CLK2P49760 499 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 TFAP2DQ7Z6R9 452 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 CLTCL1P53675 1640 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 CBX4O00257 560 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 KIAA0391O15091 583 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 KRT16P08779 473 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 PCSK1P29120 753 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 FLT3P36888 993 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 HALP42357 657 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 MAGEB18Q96M61 343 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 KLHL25Q9H0H3 589 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 DGKKQ5KSL6 1271 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 KHDRBS2Q5VWX1 349 aaKnown RBP20.28■□□□□ 0.84
SNX27-204ENST00000458013 SLFN11Q7Z7L1 901 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 OOSP2Q86WS3 158 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 DEPDC7Q96QD5 511 aa20.28■□□□□ 0.84
SNX27-204ENST00000458013 CNTNAP2Q9UHC6 1331 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 PLA2G6O60733 806 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 DSG3P32926 999 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 CAMK2GQ13555 558 aaPredicted RBP20.27■□□□□ 0.84
SNX27-204ENST00000458013 ZSCAN18Q8TBC5 510 aaPredicted RBP20.27■□□□□ 0.84
SNX27-204ENST00000458013 ALDH1A2O94788 518 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 CALCAP01258 141 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 PSMC3P17980 439 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 TKFCQ3LXA3 575 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 LRRC8DQ7L1W4 858 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 DEFB128Q7Z7B8 93 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 KRT78Q8N1N4 520 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 ACER1Q8TDN7 264 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 COPS7BQ9H9Q2 264 aaPredicted RBP20.27■□□□□ 0.84
SNX27-204ENST00000458013 FGFR3P22607 806 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 CPT1AP50416 773 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 PRKCQQ04759 706 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 RIPOR1Q6ZS17 1223 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 PHACTR4Q8IZ21 702 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 NFKBIZQ9BYH8 718 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 DCDC2Q9UHG0 476 aa20.27■□□□□ 0.84
SNX27-204ENST00000458013 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 ATP1A4Q13733 1029 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 ARHGAP15Q53QZ3 475 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 HDDC2Q7Z4H3 204 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms