RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 GOLGA8JA6NMD2 632 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SGK1O00141 431 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 HYAL3O43820 417 aaPredicted RBP15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 KAT7O95251 611 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 ADH1CP00326 375 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 ABL1P00519 1130 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 LMO2P25791 158 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 EIF2DP41214 584 aaKnown RBP15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 PTGER3P43115 390 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SLC6A11P48066 632 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 USP46P62068 366 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 RESTQ13127 1097 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SF3A1Q15459 793 aaKnown RBP15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SPDYCQ5MJ68 293 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SLC23A3Q6PIS1 610 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 HMGB4Q8WW32 186 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 ANKRD36BP1Q96IX9 119 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 FAM84AQ96KN4 292 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 RNF38Q9H0F5 515 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 TMEM74BQ9NUR3 256 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 STK17AQ9UEE5 414 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 SIX4Q9UIU6 781 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 CPQQ9Y646 472 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 CEP192Q8TEP8 1941 aa15.31■□□□□ 0.04
UPF3AP2-201ENST00000457924 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 TNNC2P02585 160 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 ATXN3P54252 364 aaPredicted RBP15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 ALCAMQ13740 583 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 GON4LQ3T8J9 2241 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 DDX42Q86XP3 938 aaKnown RBP eCLIP15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 HDDC3Q8N4P3 179 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 FRMD1Q8N878 549 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 KBTBD7Q8WVZ9 684 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 CBWD1Q9BRT8 395 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 TTLL2Q9BWV7 592 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 CRTAC1Q9NQ79 661 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 MBD1Q9UIS9 605 aaPredicted RBP15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 MSRB2Q9Y3D2 182 aa15.3■□□□□ 0.04
UPF3AP2-201ENST00000457924 ADAMTS9Q9P2N4 1935 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 ATXN2Q99700 1313 aaKnown RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 A0A0A0MRY4 1105 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SPAARA0A1B0GVQ0 90 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 TCRBV21S2A2A0A5A6 115 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 OLFM2O95897 454 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 CFIP05156 583 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 PDGFRBP09619 1106 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 ADH5P11766 374 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 HOXD12P35452 270 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 GRIA2P42262 883 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 TNFRSF4P43489 277 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 KIR2DL1P43626 348 aaPredicted RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SIM1P81133 766 aaPredicted RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 KDSRQ06136 332 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SEMA3BQ13214 749 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 ACAP1Q15027 740 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 RABEP1Q15276 862 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 MAP7D1Q3KQU3 841 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 EMC10Q5UCC4 262 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 RRAGBQ5VZM2 374 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 LARP1BQ659C4 914 aaKnown RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 RHBDF2Q6PJF5 856 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 BRAPQ7Z569 592 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 C12orf40Q86WS4 652 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SFTPA1Q8IWL2 248 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 GPD1LQ8N335 351 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 MYCBPAPQ8TBZ2 947 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 DNAJC19Q96DA6 116 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 PCED1BQ96HM7 432 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SLITRK1Q96PX8 696 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 OLFML3Q9NRN5 406 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 INTS13Q9NVM9 706 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 TBC1D14Q9P2M4 693 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 SMC3Q9UQE7 1217 aa15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 MYO18AQ92614 2054 aaKnown RBP15.29■□□□□ 0.04
UPF3AP2-201ENST00000457924 UPK3BL1B0FP48 263 aa15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 UPK3BL2E5RIL1 263 aa15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 F8VP50 259 aa15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 H0Y626 953 aa15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 SCAMP3O14828 347 aaKnown RBP15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 AP5Z1O43299 807 aa15.28■□□□□ 0.04
UPF3AP2-201ENST00000457924 TRIM16O95361 564 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms