RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 FAM111AQ96PZ2 611 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 NR1H4Q96RI1 486 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 SRPK1Q96SB4 655 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 TBCBQ99426 244 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 CENPKQ9BS16 269 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 CNPY3Q9BT09 278 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 CADM1Q9BY67 442 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 GLIS2Q9BZE0 524 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 TRIM4Q9C037 500 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 MTMR12Q9C0I1 747 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 YIPF3Q9GZM5 350 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 DNAJC5Q9H3Z4 198 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 Q9H521 79 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 DENND2DQ9H6A0 471 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 DHX33Q9H6R0 707 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 KIF9Q9HAQ2 790 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 PRDM16Q9HAZ2 1276 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 SLC24A3Q9HC58 644 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 GPAMQ9HCL2 828 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 VCX3AQ9NNX9 186 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 MYOZ2Q9NPC6 264 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 CYLDQ9NQC7 956 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF277Q9NRM2 450 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 HOXC10Q9NYD6 342 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 TXNDC16Q9P2K2 825 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 STX18Q9P2W9 335 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 PPARGC1AQ9UBK2 798 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 NXF1Q9UBU9 619 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 DNAJB4Q9UDY4 337 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZC3H7BQ9UGR2 993 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 BCAP29Q9UHQ4 241 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 MID2Q9UJV3 735 aa3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZMYND8Q9ULU4 1186 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 APOBEC2Q9Y235 224 aaKnown RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 MAFBQ9Y5Q3 323 aaPredicted RBP3.47□□□□□ -1.85
HMGN1P18-201ENST00000457642 PTPRJQ12913 1337 aa3.46□□□□□ -1.85
HMGN1P18-201ENST00000457642 ADGRA2Q96PE1 1338 aa3.46□□□□□ -1.85
HMGN1P18-201ENST00000457642 ZNF541Q9H0D2 1346 aa3.46□□□□□ -1.85
HMGN1P18-201ENST00000457642 WDR81Q562E7 1941 aa3.46□□□□□ -1.85
HMGN1P18-201ENST00000457642 KIAA1217Q5T5P2 1943 aa3.46□□□□□ -1.85
HMGN1P18-201ENST00000457642 GOLGA8QA0A0J9YX86 632 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TCRBV9S1A1TA0A576 114 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TCRBV5S1A1TA0A578 114 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 BCLAF3A2AJT9 711 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GOLGA8OA6NCC3 632 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 A6NHS1 94 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 C3orf70A6NLC5 250 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 HACD1B0YJ81 288 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF487B1APH4 448 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 B2RBV5 119 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GOLGA8NF8WBI6 632 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 H3BRJ5 948 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GOLGA8RI6L899 631 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 INO80B-WBP1J3KQ70 363 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACKR2O00590 384 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 WNT10BO00744 389 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPYSL4O14531 572 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GSC2O15499 205 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCNN4O15554 427 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 B4GALT4O60513 344 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GLRA3O75311 464 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ENTPD5O75356 428 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 H2AFYO75367 372 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MAFO75444 373 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 BANF1O75531 89 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CAPN15O75808 1086 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM155BO75949 473 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MICAL2O94851 1124 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM63AO94886 807 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ATG7O95352 703 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 BAG2O95816 211 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 APOEP02649 317 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ENO1P06733 434 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FESP07332 822 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CFHP08603 1231 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 DHRS4L1P0CG22 281 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TGFB3P10600 412 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RARBP10826 455 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MCF2P10911 925 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MYL2P10916 166 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PYGBP11216 843 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MYL4P12829 197 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PDGFRAP16234 1089 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TPSB2P20231 275 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MX2P20592 715 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 UBA1P22314 1058 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GRK2P25098 689 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MIPP30301 263 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SDC4P31431 198 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RFC1P35251 1148 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FDFT1P37268 417 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CCNFP41002 786 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ASPAP45381 313 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GABRB2P47870 512 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC26A2P50443 739 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAP1GDS1P52306 607 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF143P52747 638 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GDF10P55107 478 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms