RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RNF157Q96PX1 679 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 KDM4CQ9H3R0 1056 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 VPS37BQ9H9H4 285 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 FLRT1Q9NZU1 646 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 SENP1Q9P0U3 644 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 HAS3O00219 553 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 OAS1P00973 400 aaKnown RBP17.42■□□□□ 0.38
CCDC43-202ENST00000457422 AKAP5P24588 427 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 SLC18A1P54219 525 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 ROR1Q01973 937 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 EFHC2Q5JST6 749 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 TLK2Q86UE8 772 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 TAB3Q8N5C8 712 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-202ENST00000457422 SGSM3Q96HU1 749 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 LPIN3Q9BQK8 851 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 TRIM6Q9C030 488 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-202ENST00000457422 DPEP3Q9H4B8 488 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 NKIRAS1Q9NYS0 192 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 CLUHO75153 1309 aa17.42■□□□□ 0.38
CCDC43-202ENST00000457422 ZNF487B1APH4 448 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PIRO00625 290 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 MDM4O15151 490 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PAPSS1O43252 624 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 HCRTO43612 131 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 CD4P01730 458 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 GHRP10912 638 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 TSHRP16473 764 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 SDC4P31431 198 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PHBP35232 272 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 SCNN1AP37088 669 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 RPL34P49207 117 aaKnown RBP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 GPX6P59796 221 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ATP11AP98196 1134 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 MAP2K5Q13163 448 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 XKR4Q5GH76 650 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PACS2Q86VP3 889 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 FAM71DQ8N9W8 422 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ATP11CQ8NB49 1132 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 OR6B3Q8NGW1 331 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 TMEM40Q8WWA1 233 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 MLXIPLQ9NP71 852 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 CAPN7Q9Y6W3 813 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PRPF4O43172 522 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 SNX3O60493 162 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 GABBR2O75899 941 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 TMEM63AO94886 807 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 DESP17661 470 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 TGM2P21980 687 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 IL4RP24394 825 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 CBLBQ13191 982 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 FNBP1LQ5T0N5 605 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ARCQ7LC44 396 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ANKMY2Q8IV38 441 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 CRYBG2Q8N1P7 616 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PYROXD1Q8WU10 500 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 FAM172AQ8WUF8 416 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 MAGEB18Q96M61 343 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 ELAC2Q9BQ52 826 aaKnown RBP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 CYLDQ9NQC7 956 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 GPATCH2LQ9NWQ4 482 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 GDAP2Q9NXN4 497 aa17.41■□□□□ 0.38
CCDC43-202ENST00000457422 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 TRIP12Q14669 1992 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-202ENST00000457422 FAM47DPA6NHR8 397 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 TCP11X1B4DZS4 312 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 CAPN15O75808 1086 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 ZNF865P0CJ78 1059 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 KCNE1P15382 129 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PTPN9P43378 593 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PSEN2P49810 448 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 KRT81Q14533 505 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 SNX17Q15036 470 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 MSS51Q4VC12 460 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 SLC9A4Q6AI14 798 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 LIMS2Q7Z4I7 341 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 KBTBD7Q8WVZ9 684 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 FAF2Q96CS3 445 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 RTP4Q96DX8 246 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 ZNF560Q96MR9 790 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 WDR83Q9BRX9 315 aaKnown RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 NGRNQ9NPE2 291 aaKnown RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 KLK14Q9P0G3 267 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PSMC3IPQ9P2W1 217 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 TCRBV7S3A2A0A539 114 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 A8MXQ7 604 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 XPOTO43592 962 aaKnown RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 STX2P32856 288 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PNPLA4P41247 253 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 BCAT1P54687 386 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 NRLP54845 237 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 BST2Q10589 180 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms