RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 ST13P5Q8NFI4 369 aaPredicted RBP8.97□□□□□ -0.97
SP140-207ENST00000456542 BPIFB1Q8TDL5 484 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 TFAP2BQ92481 460 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 IRF7Q92985 503 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 USP13Q92995 863 aaPredicted RBP8.97□□□□□ -0.97
SP140-207ENST00000456542 RSPRY1Q96DX4 576 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 VPS16Q9H269 839 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 BRD9Q9H8M2 597 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 TRPC7Q9HCX4 862 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 PLCB1Q9NQ66 1216 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 TLR8Q9NR97 1041 aaKnown RBP8.97□□□□□ -0.97
SP140-207ENST00000456542 DNAJC12Q9UKB3 198 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 FBXL21Q9UKT6 434 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 ARHGAP26Q9UNA1 814 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
SP140-207ENST00000456542 SCML2Q9UQR0 700 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 KMT2EQ8IZD2 1858 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 MIA3Q5JRA6 1907 aa8.97□□□□□ -0.97
SP140-207ENST00000456542 FAM86C2PA6NEL3 165 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 LGALS16A8MUM7 142 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 BECN2A8MW95 431 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ARNTLO00327 626 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ZNF263O14978 683 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 MED7O43513 233 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 UCHL3P15374 230 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 HDCP19113 662 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 BRD2P25440 801 aaKnown RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 MLLT6P55198 1093 aaPredicted RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 SLC7A9P82251 487 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 APBA1Q02410 837 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 PRKCQQ04759 706 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 PDE4CQ08493 712 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 GRM2Q14416 872 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 IQCB1Q15051 598 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ARHGAP44Q17R89 818 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ZSCAN23Q3MJ62 389 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 HECTD3Q5T447 861 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 KLHDC7AQ5VTJ3 777 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 HFE2Q6ZVN8 426 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 APTXQ7Z2E3 356 aaKnown RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 YAF2Q8IY57 180 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 SCML4Q8N228 414 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 FBXL6Q8N531 539 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ZNF276Q8N554 614 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ARL14EPQ8N8R7 260 aaPredicted RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 SLC35F5Q8WV83 523 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 KCTD13Q8WZ19 329 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ERGIC2Q96RQ1 377 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 SLC22A12Q96S37 553 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 CYP2S1Q96SQ9 504 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ZSWIM1Q9BR11 485 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 LRFN3Q9BTN0 628 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 NAA15Q9BXJ9 866 aaKnown RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 SMG9Q9H0W8 520 aaKnown RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 ARHGEF3Q9NR81 526 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 THG1LQ9NWX6 298 aaKnown RBP8.96□□□□□ -0.98
SP140-207ENST00000456542 CLIC5Q9NZA1 410 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 GMIPQ9P107 970 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 CCL26Q9Y258 94 aa8.96□□□□□ -0.98
SP140-207ENST00000456542 KRBA1A5PL33 1030 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 M0QYV0 167 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 CYP26A1O43174 497 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 ABL1P00519 1130 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 ATP1A3P13637 1013 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 GNA15P30679 374 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 GDI1P31150 447 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 TKTL1P51854 596 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 STARD6P59095 220 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 BPIFB4P59827 614 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 PTK2Q05397 1052 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 DRAP1Q14919 205 aaPredicted RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 MLF2Q15773 248 aaPredicted RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 ZNF77Q15935 545 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 PM20D1Q6GTS8 502 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 KLHDC10Q6PID8 442 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
SP140-207ENST00000456542 FAM71AQ8IYT1 594 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 SIX5Q8N196 739 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 ARHGAP18Q8N392 663 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 ZNF606Q8WXB4 792 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 SECISBP2LQ93073 1101 aaKnown RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 MSANTD3Q96H12 275 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 SHDQ96IW2 340 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 HSFY1Q96LI6 401 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 LRRC3BQ96PB8 259 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 DDX23Q9BUQ8 820 aaKnown RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 LSM14BQ9BX40 385 aaKnown RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 RNF38Q9H0F5 515 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 GANQ9H2C0 597 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 MFSD1Q9H3U5 465 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 LRRC4Q9HBW1 653 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 CHORDC1Q9UHD1 332 aaPredicted RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 AJAP1Q9UKB5 411 aaPredicted RBP8.95□□□□□ -0.98
SP140-207ENST00000456542 CA14Q9ULX7 337 aa8.95□□□□□ -0.98
SP140-207ENST00000456542 SIK3Q9Y2K2 1263 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms