RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ACOX2Q99424 681 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ST6GALNAC4Q9H4F1 302 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 INTS13Q9NVM9 706 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GDAP2Q9NXN4 497 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HSPBP1Q9NZL4 362 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NXF1Q9UBU9 619 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CYP8B1Q9UNU6 501 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HELZ2Q9BYK8 2649 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MDM4O15151 490 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CLIC2O15247 247 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OLFM2O95897 454 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ADH1CP00326 375 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TNNC2P02585 160 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HOXB2P14652 356 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GAP43P17677 238 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NDUFV2P19404 249 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 WARSP23381 471 aaKnown RBP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAGEA11P43364 429 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC5A3P53794 718 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MYL6P60660 151 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RBP5P82980 135 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 AMPD2Q01433 879 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MYO1EQ12965 1108 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ANO4Q32M45 955 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RRAGBQ5VZM2 374 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM171BQ6P995 826 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RHBDF2Q6PJF5 856 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C19orf48Q6RUI8 117 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LAYNQ6UX15 382 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C4orf50Q6ZRC1 276 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TOGARAM2Q6ZUX3 1019 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LPCAT2Q7L5N7 544 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GPRIN1Q7Z2K8 1008 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LIMS2Q7Z4I7 341 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM35AQ86V20 835 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC41A1Q8IVJ1 513 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CHCHD4Q8N4Q1 142 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PNPLA1Q8N8W4 532 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FSIP1Q8NA03 581 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OR6B3Q8NGW1 331 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PLEKHO2Q8TD55 490 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FOXD4L4Q8WXT5 416 aaPredicted RBP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FBXO32Q969P5 355 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FUBP3Q96I24 572 aaKnown RBP eCLIP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ANKRD36BP1Q96IX9 119 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HSPA12BQ96MM6 686 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KCNK16Q96T55 309 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TTLL2Q9BWV7 592 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 B3GNT5Q9BYG0 378 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SDCBP2Q9H190 292 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SNX25Q9H3E2 840 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CD248Q9HCU0 757 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM49BQ9NUQ9 324 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PANK4Q9NVE7 773 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CACNA2D2Q9NY47 1150 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TRPM5Q9NZQ8 1165 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAGEC2Q9UBF1 373 aaPredicted RBP6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 STK17AQ9UEE5 414 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KCNG1Q9UIX4 513 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZMYM5Q9UJ78 669 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NUDT5Q9UKK9 219 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CDH9Q9ULB4 789 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LHX6Q9UPM6 363 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EXOC7Q9UPT5 735 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLCO1B1Q9Y6L6 691 aa6.38□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CABIN1Q9Y6J0 2220 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TP53BP1Q12888 1972 aaPredicted RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PLXNB3Q9ULL4 1909 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FRMD3A2A2Y4 597 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TBC1D3BA6NDS4 549 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NEDD8-MDP1E9PL57 170 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TRIM66O15016 1216 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CYP26A1O43174 497 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TULP3O75386 442 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TBX18O95935 607 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BMP15O95972 392 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 APODP05090 189 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CEACAM1P13688 526 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CSRP1P21291 193 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GARTP22102 1010 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PAX3P23760 479 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAOBP27338 520 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TXLNAP40222 546 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LHX1P48742 406 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CDH8P55286 799 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TNNC1P63316 161 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ASIC1P78348 528 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC7A9P82251 487 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NR1H3Q13133 447 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 POSTNQ15063 836 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SNRNP35Q16560 246 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 VSTM1Q6UX27 236 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KIAA1324Q6UXG2 1013 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TPGS1Q6ZTW0 290 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SV2BQ7L1I2 683 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms