RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NACC2Q96BF6 587 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 GPR20Q99678 358 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 PABPC3Q9H361 631 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 SAYSD1Q9NPB0 183 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 PRDM8Q9NQV8 689 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 SMPD4Q9NXE4 827 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RRN3Q9NYV6 651 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 TMOD4Q9NZQ9 345 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RNF181Q9P0P0 153 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 DNAJB11Q9UBS4 358 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 LPAR3Q9UBY5 353 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 POLG2Q9UHN1 485 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 EIF2B4Q9UI10 523 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 A0A0B4J269 797 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TOR1BO14657 336 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ERN1O75460 977 aaKnown RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 RASAL1O95294 804 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ANXA6P08133 673 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TNFRSF1AP19438 455 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 HIBADHP31937 336 aaKnown RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 NPTX2P47972 431 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 EIF5P55010 431 aaKnown RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 GEMIN4P57678 1058 aaKnown RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TIAL1Q01085 375 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TBX2Q13207 712 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 CCNIQ14094 377 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 E2F2Q14209 437 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ICAM4Q14773 271 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC4A8Q2Y0W8 1093 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIM60Q495X7 471 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 CERCAMQ5T4B2 595 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 HERC6Q8IVU3 1022 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ADGRG5Q8IZF4 528 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 SPARTQ8N0X7 666 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 MBD3L2Q8NHZ7 208 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 DNAJB14Q8TBM8 379 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 USP13Q92995 863 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 SDCCAG3Q96C92 435 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZSCAN31Q96LW9 406 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 MLXIPQ9HAP2 919 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 GBA2Q9HCG7 927 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRPM5Q9NZQ8 1165 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 MYRFQ9Y2G1 1151 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 COL15A1P39059 1388 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 ERCC6L2Q5T890 1561 aa4.35□□□□□ -1.71
HMGB1P15-201ENST00000453854 SETD1BQ9UPS6 1966 aaKnown RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ADM5C9JUS6 153 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 EIF3FO00303 357 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RGS10O43665 173 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIAP1O43715 76 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 CCNT2O60583 730 aaKnown RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SRGAP2O75044 1071 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 CBFA2T3O75081 653 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RECQL4O94761 1208 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ACTL6BO94805 426 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 AGR2O95994 175 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 VIPP01282 170 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 GATA3P23771 443 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 CD6P30203 668 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 UQCRC1P31930 480 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ADD2P35612 726 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 PRKAG1P54619 331 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM189BP81408 668 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 FPGSQ05932 587 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 TUBB3Q13509 450 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 TOB2Q14106 344 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 CD300EQ496F6 205 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RABL3Q5HYI8 236 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RBM20Q5T481 1227 aaKnown RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ARHGAP40Q5TG30 622 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 VPS53Q5VIR6 699 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 JAKMIP3Q5VZ66 844 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RGS7BPQ6MZT1 257 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ARMC6Q6NXE6 501 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 KLHL17Q6TDP4 642 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 KRT77Q7Z794 578 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RASGRP3Q8IV61 690 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SLC15A3Q8IY34 581 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 CLASRPQ8N2M8 674 aaKnown RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SIMC1Q8NDZ2 872 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ABHD5Q8WTS1 349 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SNX19Q92543 992 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 TTC14Q96N46 770 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 C8orf49Q96NF6 230 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 WDR24Q96S15 920 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RTKNQ9BST9 563 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM167BQ9BTA0 163 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 AMBRA1Q9C0C7 1298 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 TWSG1Q9GZX9 223 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 RSPH9Q9H1X1 276 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 AURKAIP1Q9NWT8 199 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 KIF17Q9P2E2 1029 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 ASAP1Q9ULH1 1129 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SORCS3Q9UPU3 1222 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms