RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 LRP3O75074 770 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 ADH1CP00326 375 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 EIF2DP41214 584 aaKnown RBP18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 MXI1P50539 228 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 SLC8A3P57103 927 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 PPP3CAQ08209 521 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 C1orf220Q5T0J3 134 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 NUDT18Q6ZVK8 323 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 PAQR9Q6ZVX9 377 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 TADA2BQ86TJ2 420 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 WDR5BQ86VZ2 330 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 TAS1R2Q8TE23 839 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 CYFIP2Q96F07 1278 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 DUSP9Q99956 384 aaKnown RBP18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 SDCBP2Q9H190 292 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
TNFRSF4-202ENST00000453580 PRR5-ARHGAP8B1AHC4 643 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 K7ESF4 209 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 TNFRSF10BO14763 440 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 PSMA7O14818 248 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 TRIM49P0CI25 452 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 TRIM49CP0CI26 452 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 FNTBP49356 437 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 PSEN1P49768 467 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 CACNA2D1P54289 1103 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 YWHAEP62258 255 aaKnown RBP18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 ARHGAP8P85298 464 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 PRR23BQ6ZRT6 265 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 CEP68Q76N32 757 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 RIN3Q8TB24 985 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 RNF38Q9H0F5 515 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 MMRN2Q9H8L6 949 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 METTL14Q9HCE5 456 aaKnown RBP18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 TMEM30AQ9NV96 361 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 RAB20Q9NX57 234 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 CFAP97Q9P2B7 532 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 SH3BP1Q9Y3L3 701 aa18.07■□□□□ 0.48
TNFRSF4-202ENST00000453580 RNF40O75150 1001 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 CILPO75339 1184 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 EGFP01133 1207 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 RETP07949 1114 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 CCDC130P13994 396 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 PRCPP42785 496 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 MAP3K7CLP57077 242 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 LMNB2Q03252 620 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 SPOPLQ6IQ16 392 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 SYT13Q7L8C5 426 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 ADGRG2Q8IZP9 1017 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 SPATA20Q8TB22 786 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 CDK5RAP1Q96SZ6 601 aaKnown RBP18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 SMOQ99835 787 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 LINC00597Q9H2U6 94 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 SMPD4Q9NXE4 827 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 CHORDC1Q9UHD1 332 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 USP34Q70CQ2 3546 aa18.06■□□□□ 0.48
TNFRSF4-202ENST00000453580 COCHO43405 550 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 ZDHHC11BP0C7U3 371 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 ADORA2BP29275 332 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 PUM1Q14671 1186 aaKnown RBP eCLIP18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 HSF5Q4G112 596 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 BTBD8Q5XKL5 378 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 HEATR6Q6AI08 1181 aaKnown RBP18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 SCAMP5Q8TAC9 235 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 CHFRQ96EP1 664 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 SCML2Q9UQR0 700 aa18.05■□□□□ 0.48
TNFRSF4-202ENST00000453580 CD58P19256 250 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 ATP5C1P36542 298 aaKnown RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 MRPS21P82921 87 aaKnown RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 GAD2Q05329 585 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 CETN1Q12798 172 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 DHCR24Q15392 516 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 KLHDC10Q6PID8 442 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 CLEC20AQ6ZU45 233 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 SMYD4Q8IYR2 804 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 DCLK2Q8N568 766 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 C12orf29Q8N999 325 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 LOXL4Q96JB6 756 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 HEXIM2Q96MH2 286 aaKnown RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 PNKPQ96T60 521 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 APOBEC3GQ9HC16 384 aaKnown RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 GMIPQ9P107 970 aa18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 LSM7Q9UK45 103 aaKnown RBP18.04■□□□□ 0.48
TNFRSF4-202ENST00000453580 MYO16Q9Y6X6 1858 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 BICDL2A1A5D9 508 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 TLR5O60602 858 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 APODP05090 189 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 CYP17A1P05093 508 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 CCDC192P0DO97 292 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 RALAP11233 206 aa18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 DCAF17Q5H9S7 520 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF4-202ENST00000453580 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms