RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CFHP08603 1231 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.25
SNX17-204ENST00000453453 PSEN1P49768 467 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 SEC24CP53992 1094 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 SLC8A3P57103 927 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 PSMC1P62191 440 aaKnown RBP16.64■□□□□ 0.25
SNX17-204ENST00000453453 GPC5P78333 572 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 MRPS25P82663 173 aaKnown RBP16.64■□□□□ 0.25
SNX17-204ENST00000453453 MAPRE1Q15691 268 aaKnown RBP16.64■□□□□ 0.25
SNX17-204ENST00000453453 FAM171A1Q5VUB5 890 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 DENND1BQ6P3S1 775 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 KCNT2Q6UVM3 1135 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 SLFN11Q7Z7L1 901 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 PHOSPHO2Q8TCD6 241 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 ZNF653Q96CK0 615 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 TLCD1Q96CP7 247 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 VCPIP1Q96JH7 1222 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 INSL6Q9Y581 213 aa16.64■□□□□ 0.25
SNX17-204ENST00000453453 NT5C1B-RDH14C9J2C7 533 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CAPN15O75808 1086 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CALB1P05937 261 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 SETSIPP0DME0 302 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 SNX16P57768 344 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 ITIH4Q14624 930 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 MDH1BQ5I0G3 518 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 PPP1R26Q5T8A7 1209 aaPredicted RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 PHF13Q86YI8 300 aaPredicted RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 FIBCD1Q8N539 461 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 MED10Q9BTT4 135 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 MIS12Q9H081 205 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 ADAM22Q9P0K1 906 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 MRPL42Q9Y6G3 142 aaKnown RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 NCANO14594 1321 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CCDC130P13994 396 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 ATP2A2P16615 1042 aaKnown RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 ADORA2BP29275 332 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 GBP1P32455 592 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 PPM1AP35813 382 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 PBX3P40426 434 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 BCAT1P54687 386 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 HTRA4P83105 476 aaPredicted RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 RIPK1Q13546 671 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CRYMQ14894 314 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 TMC3Q7Z5M5 1100 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 RHOT2Q8IXI1 618 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 MCOLN2Q8IZK6 566 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 COLGALT1Q8NBJ5 622 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 CCHCR1Q8TD31 782 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 SLC2A14Q8TDB8 520 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 TMEM169Q96HH4 297 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 IGSF21Q96ID5 467 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 OXCT2Q9BYC2 517 aaPredicted RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 THAP2Q9H0W7 228 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 SYNCQ9H7C4 482 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 PPANQ9NQ55 473 aaKnown RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 CXXC1Q9P0U4 656 aaPredicted RBP16.63■□□□□ 0.25
SNX17-204ENST00000453453 GTF3C4Q9UKN8 822 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 STRIP2Q9ULQ0 834 aa16.63■□□□□ 0.25
SNX17-204ENST00000453453 VWA8A3KMH1 1905 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 FAM170AA1A519 330 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 CFAP73A6NFT4 308 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 H7C4K7 107 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 KCNK3O14649 394 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 MGRN1O60291 552 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 PPFIA2O75334 1257 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 OAZ2O95190 189 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 DRD4P21917 467 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 FGFR3P22607 806 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 SCTRP47872 440 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 LMNB2Q03252 620 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 BST2Q10589 180 aaKnown RBP16.62■□□□□ 0.25
SNX17-204ENST00000453453 INTS6LQ5JSJ4 861 aaKnown RBP16.62■□□□□ 0.25
SNX17-204ENST00000453453 VARS2Q5ST30 1063 aaKnown RBP16.62■□□□□ 0.25
SNX17-204ENST00000453453 MON1BQ7L1V2 547 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 DCP1BQ8IZD4 617 aaKnown RBP16.62■□□□□ 0.25
SNX17-204ENST00000453453 ANKRD52Q8NB46 1076 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 UBA3Q8TBC4 463 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 RAPGEF5Q92565 580 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 HNRNPABQ99729 332 aaKnown RBP16.62■□□□□ 0.25
SNX17-204ENST00000453453 C11orf70Q9BRQ4 267 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 FAM129AQ9BZQ8 928 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 RAB17Q9H0T7 212 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 SPG21Q9NZD8 308 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 CTTNBP2NLQ9P2B4 639 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 CNOT8Q9UFF9 292 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms