RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LMO2P25791 158 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 GRIN1Q05586 938 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 TAF10Q12962 218 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 CCDC142Q17RM4 750 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 SNX30Q5VWJ9 437 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 ETFBKMTQ8IXQ9 262 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 PGBD3Q8N328 593 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 RLN3Q8WXF3 142 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 EPSTI1Q96J88 318 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 IKZF4Q9H2S9 585 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 FAM124BQ9H5Z6 455 aaPredicted RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 DNAAF2Q9NVR5 837 aaKnown RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 COMMD8Q9NX08 183 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 DEC1Q9P2X7 70 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 SUSD2Q9UGT4 822 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 LHX6Q9UPM6 363 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 STARD13Q9Y3M8 1113 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 SRPRBQ9Y5M8 271 aaKnown RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 PCNX2A6NKB5 2137 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 ATP8B3O60423 1300 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 STAU1O95793 577 aaKnown RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 TOP3BO95985 862 aaKnown RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 ITPKAP23677 461 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 YWHAQP27348 245 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 GNL1P36915 607 aaPredicted RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 SLC6A11P48066 632 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 CASP5P51878 434 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 RPL6Q02878 288 aaKnown RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 ARMCX6Q7L4S7 300 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 RAB44Q7Z6P3 723 aaPredicted RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 NUP93Q8N1F7 819 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 ZNF513Q8N8E2 541 aaPredicted RBP15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 LRRC27Q9C0I9 530 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
LYSMD3-202ENST00000453259 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 TBC1D3BA6NDS4 549 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 HCRTO43612 131 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 IDEP14735 1019 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 PDCP20941 246 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 NTSR1P30989 418 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 RING1Q06587 406 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 ZNF33AQ06730 810 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 LY6G5CQ5SRR4 150 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 HECTD3Q5T447 861 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 SDE2Q6IQ49 451 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 C12orf40Q86WS4 652 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 PROSER1Q86XN7 944 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 TERB1Q8NA31 727 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 ZSWIM2Q8NEG5 633 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 OR5B17Q8NGF7 314 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 ZDHHC5Q9C0B5 715 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 PANK4Q9NVE7 773 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 TBC1D7Q9P0N9 293 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 KLK13Q9UKR3 277 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 SH3BP1Q9Y3L3 701 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 AKAP13Q12802 2813 aa15.19■□□□□ 0.02
LYSMD3-202ENST00000453259 DMXL2Q8TDJ6 3036 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 TULP3O75386 442 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 ABL1P00519 1130 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 PDGFRBP09619 1106 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 HOXB2P14652 356 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 GABRG2P18507 467 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 ATICP31939 592 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 PI4KAP42356 2102 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 TNNC1P63316 161 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 KDSRQ06136 332 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 SYCP2LQ5T4T6 812 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 KIAA1211LQ6NV74 962 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 MINDY1Q8N5J2 469 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 FOXJ1Q92949 421 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 GTPBP2Q9BX10 602 aaKnown RBP15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 SPHK2Q9NRA0 654 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 CALCOCO1Q9P1Z2 691 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 FBXO2Q9UK22 296 aaPredicted RBP15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 PCDH15Q96QU1 1955 aa15.18■□□□□ 0.02
LYSMD3-202ENST00000453259 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 FAM92AA1XBS5 289 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 GFRA2O00451 464 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 COCHO43405 550 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 GNSP15586 552 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 STAT6P42226 847 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms