RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 GCNT1Q02742 428 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
DDR1-239ENST00000452441 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 ANKS1BQ7Z6G8 1248 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 DNAJB3Q8WWF6 145 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
DDR1-239ENST00000452441 USP18Q9UMW8 372 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 TCRBV7S3A2A0A539 114 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 PAX7P23759 505 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 KBTBD12Q3ZCT8 623 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.552e-8■■□□□ 13.3
DDR1-239ENST00000452441 PGLYRP2Q96PD5 576 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 TSSK1BQ9BXA7 367 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 MAGEB5Q9BZ81 275 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 LRRC19Q9H756 370 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
DDR1-239ENST00000452441 DONSONQ9NYP3 566 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 WHRNQ9P202 907 aa11.64□□□□□ -0.55
DDR1-239ENST00000452441 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
DDR1-239ENST00000452441 FSCN2O14926 492 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 HAUS5O94927 633 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 KRT7P08729 469 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 NDST1P52848 882 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 OAZ1P54368 228 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 CYP1B1Q16678 543 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 DCAF6Q58WW2 860 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 NDUFAF2Q8N183 169 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 POU5F2Q8N7G0 328 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 SYT17Q9BSW7 474 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 TMEM109Q9BVC6 243 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 KCNK1O00180 336 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 SRGAP2BP0DMP2 458 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 ABCD1P33897 745 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 OGDHQ02218 1023 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 GOLGA7BQ2TAP0 167 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 DENND5BQ6ZUT9 1274 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 NLRP9Q7RTR0 991 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 OSBPL1AQ9BXW6 950 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 GCOM2Q9BZD3 368 aaPredicted RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 IFT122Q9HBG6 1241 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 ASNSD1Q9NWL6 643 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 CPSF2Q9P2I0 782 aaKnown RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 PSMC3IPQ9P2W1 217 aaPredicted RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 RBL1P28749 1068 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 FOXN2P32314 431 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 POLNQ7Z5Q5 900 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 BRSK2Q8IWQ3 736 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 SIX6OS1Q8N1H7 587 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 GBP7Q8N8V2 638 aaPredicted RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 MAGEC3Q8TD91 643 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 PPP4R1Q8TF05 950 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 CKAP2Q8WWK9 683 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 EXT2Q93063 718 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 MFSD14AQ96MC6 490 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 SLITRK1Q96PX8 696 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 RAB3IPQ96QF0 476 aaPredicted RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 CCDC134Q9H6E4 229 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 GOLGA2P5Q9HBQ8 144 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 PRMT7Q9NVM4 692 aaPredicted RBP11.63□□□□□ -0.55
DDR1-239ENST00000452441 ARHGAP28Q9P2N2 729 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 NUDT5Q9UKK9 219 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
DDR1-239ENST00000452441 HUS1O60921 280 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 DGKIO75912 1065 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 LYPLA2O95372 231 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 TOP3BO95985 862 aaKnown RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 CELF3Q5SZQ8 465 aaKnown RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 EXD1Q8NHP7 514 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 SGF29Q96ES7 293 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 TXLNGQ9NUQ3 528 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 SLC17A6Q9P2U8 582 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 C15orf41Q9Y2V0 281 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 FZD9O00144 591 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 CYB561D2O14569 222 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 C4BPAP04003 597 aaKnown RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 HMGCRP04035 888 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 LGALS2P05162 132 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 SERPINB3P29508 390 aa11.62□□□□□ -0.55
DDR1-239ENST00000452441 RPL22P35268 128 aaKnown RBP11.62□□□□□ -0.55
DDR1-239ENST00000452441 RBP5P82980 135 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms