RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 PIGZQ86VD9 579 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 SIX6OS1Q8N1H7 587 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 ARL14EPQ8N8R7 260 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 KAT5Q92993 513 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 VPS16Q9H269 839 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 C8orf33Q9H7E9 229 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-212ENST00000451542 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 CNTN6Q9UQ52 1028 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 ANAPC1Q9H1A4 1944 aa12.7□□□□□ -0.38
SMPD4-212ENST00000451542 C2orf78A6NCI8 922 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-212ENST00000451542 TCF3P15923 654 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 ATP5C1P36542 298 aaKnown RBP12.69□□□□□ -0.38
SMPD4-212ENST00000451542 IFNAR2P48551 515 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 KIF11P52732 1056 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 SNX16P57768 344 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 SLC7A9P82251 487 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 PDE4CQ08493 712 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 NR1H3Q13133 447 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 MTF1Q14872 753 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 KRT31Q15323 416 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 MEA1Q16626 185 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 MIIPQ5JXC2 388 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF852Q6ZMS4 543 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 TTC16Q8NEE8 873 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 GOLGA1Q92805 767 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 KREMEN1Q96MU8 473 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
SMPD4-212ENST00000451542 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 GMIPQ9P107 970 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
SMPD4-212ENST00000451542 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMPD4-212ENST00000451542 KANSL1LA0AUZ9 987 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 SYCE3A1L190 88 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 M0QYV0 167 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 NRG2O14511 850 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 THAP12O43422 761 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TLR5O60602 858 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 OLFM2O95897 454 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 ZDHHC11BP0C7U3 371 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 GNA15P30679 374 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TKTL1P51854 596 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF132P52740 706 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 STARD6P59095 220 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 RAPGEF1Q13905 1077 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 POTEHQ6S545 545 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TPRG1Q6ZUI0 275 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 UBA3Q8TBC4 463 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 SHC3Q92529 594 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 HSFY1Q96LI6 401 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 NOX5Q96PH1 765 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 CYP2S1Q96SQ9 504 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 LSM14BQ9BX40 385 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TBC1D17Q9HA65 648 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 GKN1Q9NS71 199 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 CLIC5Q9NZA1 410 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 TBC1D14Q9P2M4 693 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
SMPD4-212ENST00000451542 NAGPAQ9UK23 515 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 SH3BP1Q9Y3L3 701 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 USP3Q9Y6I4 520 aa12.68□□□□□ -0.38
SMPD4-212ENST00000451542 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 VCANP13611 3396 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 KRBA1A5PL33 1030 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 HHLA1C9JL84 531 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 RNF225M0QZC1 329 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-212ENST00000451542 SART1O43290 800 aaKnown RBP12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ZBED1O96006 694 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 AOC1P19801 751 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 AVPR2P30518 371 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 MAGEA9P43362 315 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ACADSBP45954 432 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 UBXN1Q04323 297 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ITPRIPL2Q3MIP1 535 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 RAB41Q5JT25 222 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms