RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZACNQ401N2 412 aa28.78■■■□□ 2.2
USP42-204ENST00000451154 RHBDF2Q6PJF5 856 aa28.78■■■□□ 2.2
USP42-204ENST00000451154 FUKQ8N0W3 1084 aa28.78■■■□□ 2.2
USP42-204ENST00000451154 KIAA1958Q8N8K9 716 aa28.78■■■□□ 2.2
USP42-204ENST00000451154 ZC3H10Q96K80 434 aaKnown RBP28.78■■■□□ 2.2
USP42-204ENST00000451154 ZDHHC9Q9Y397 364 aa28.78■■■□□ 2.2
USP42-204ENST00000451154 COCHO43405 550 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 AP1G2O75843 785 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 PLK5Q496M5 336 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 SPOPLQ6IQ16 392 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 SV2AQ7L0J3 742 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 SFTPA1Q8IWL2 248 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 CCDC33Q8N5R6 958 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 PDZD8Q8NEN9 1154 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 CCDC26Q8TAB7 109 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 TMC2Q8TDI7 906 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 OVCA2Q8WZ82 227 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 DMAP1Q9NPF5 467 aaPredicted RBP28.77■■■□□ 2.2
USP42-204ENST00000451154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.77■■■□□ 2.2
USP42-204ENST00000451154 EBF1Q9UH73 591 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 INVSQ9Y283 1065 aa28.77■■■□□ 2.2
USP42-204ENST00000451154 FOXD2O60548 495 aaPredicted RBP28.76■■■□□ 2.19
USP42-204ENST00000451154 ZNF806P0C7X5 589 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 P4HA1P13674 534 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 DGKEP52429 567 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 NDST1P52848 882 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 SLC5A3P53794 718 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 MESP2Q0VG99 397 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 AASDHQ4L235 1098 aaPredicted RBP28.76■■■□□ 2.19
USP42-204ENST00000451154 C1orf220Q5T0J3 134 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 HECTD3Q5T447 861 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 SMARCD1Q96GM5 515 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 DUSP15Q9H1R2 295 aaPredicted RBP28.76■■■□□ 2.19
USP42-204ENST00000451154 SMOC1Q9H4F8 434 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 CCSER2Q9H7U1 834 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 IL37Q9NZH6 218 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 GMIPQ9P107 970 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 HMGXB4Q9UGU5 601 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 FRMD4BQ9Y2L6 1034 aa28.76■■■□□ 2.19
USP42-204ENST00000451154 MYO18AQ92614 2054 aaKnown RBP28.75■■■□□ 2.19
USP42-204ENST00000451154 CALUO43852 315 aaPredicted RBP28.75■■■□□ 2.19
USP42-204ENST00000451154 BEST1O76090 585 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 MYL1P05976 194 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 PRR29P0C7W0 189 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 CCDC130P13994 396 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 SYKP43405 635 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 NDUFA8P51970 172 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 DDX42Q86XP3 938 aaKnown RBP eCLIP28.75■■■□□ 2.19
USP42-204ENST00000451154 ZMIZ2Q8NF64 920 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 TSTD1Q8NFU3 115 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 SMOQ99835 787 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 KRT82Q9NSB4 513 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 RXFP3Q9NSD7 469 aa28.75■■■□□ 2.19
USP42-204ENST00000451154 IKBKBO14920 756 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 KRT85P78386 507 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 SNX30Q5VWJ9 437 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 C12orf40Q86WS4 652 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 CRYBG2Q8N1P7 616 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 C12orf29Q8N999 325 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 C12orf50Q8NA57 414 aaPredicted RBP28.74■■■□□ 2.19
USP42-204ENST00000451154 SLC2A14Q8TDB8 520 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 ZFRQ96KR1 1074 aaKnown RBP28.74■■■□□ 2.19
USP42-204ENST00000451154 PNKPQ96T60 521 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 TBC1D14Q9P2M4 693 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 MAPK8IP1Q9UQF2 711 aa28.74■■■□□ 2.19
USP42-204ENST00000451154 E2F8A0AVK6 867 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 ASS1P00966 412 aaKnown RBP28.73■■■□□ 2.19
USP42-204ENST00000451154 HLA-DRAP01903 254 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 PGFP49763 221 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 PPM1JQ5JR12 505 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 PLA2G2CQ5R387 149 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 TAF4BQ92750 862 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 TPSD1Q9BZJ3 242 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 FAM49BQ9NUQ9 324 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 COMMD8Q9NX08 183 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 TRAF3IP3Q9Y228 551 aa28.73■■■□□ 2.19
USP42-204ENST00000451154 KAT7O95251 611 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 ADH1CP00326 375 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 ZDHHC11BP0C7U3 371 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 ADH5P11766 374 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 PIK3CAP42336 1068 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 ASPAP45381 313 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 VAMP7P51809 220 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 MAP3K7CLP57077 242 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 LY6G5CQ5SRR4 150 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 EMC10Q5UCC4 262 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 WBP2Q969T9 261 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 MMP17Q9ULZ9 603 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 SH3BP1Q9Y3L3 701 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 PCDHGA5Q9Y5G8 931 aa28.72■■■□□ 2.19
USP42-204ENST00000451154 FAM92AA1XBS5 289 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 RHOBTB1O94844 696 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 RHOBTB3O94955 611 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 APODP05090 189 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 MPLP40238 635 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 MRPS21P82921 87 aaKnown RBP28.71■■■□□ 2.19
USP42-204ENST00000451154 ELF2Q15723 593 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 ANO7Q6IWH7 933 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 UNC93AQ86WB7 457 aa28.71■■■□□ 2.19
USP42-204ENST00000451154 TTC30AQ86WT1 665 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms