RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 CD101Q93033 1021 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
MSH5-209ENST00000450148 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 CYP3A43Q9HB55 503 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
MSH5-209ENST00000450148 COMMD8Q9NX08 183 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
MSH5-209ENST00000450148 ZNF292O60281 2723 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 ANTXRLA6NF34 631 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 RNF40O75150 1001 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 CLSTN1O94985 981 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 NFATC1O95644 943 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 ABL1P00519 1130 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 CYP17A1P05093 508 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
MSH5-209ENST00000450148 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
MSH5-209ENST00000450148 DRD1P21728 446 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 GTF2H1P32780 548 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 TUBP50607 506 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 AMPD2Q01433 879 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 SRSF5Q13243 272 aaKnown RBP13.09□□□□□ -0.31
MSH5-209ENST00000450148 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 WDR5BQ86VZ2 330 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
MSH5-209ENST00000450148 WBP2Q969T9 261 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 GMIPQ9P107 970 aa13.09□□□□□ -0.31
MSH5-209ENST00000450148 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.32
MSH5-209ENST00000450148 CETN3O15182 167 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 ADORA2BP29275 332 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 ID4P47928 161 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 MXI1P50539 228 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 HECTD3Q5T447 861 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
MSH5-209ENST00000450148 RHBDF2Q6PJF5 856 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 TATDN2Q93075 761 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CCDC34Q96HJ3 373 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 FAXDC2Q96IV6 333 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 DUSP9Q99956 384 aaKnown RBP13.08□□□□□ -0.32
MSH5-209ENST00000450148 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 RMND1Q9NWS8 449 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 NCDNQ9UBB6 729 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
MSH5-209ENST00000450148 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 K7EQS6 105 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 GREM1O60565 184 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 FAM200BP0CF97 657 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 EPB41P11171 864 aaKnown RBP13.07□□□□□ -0.32
MSH5-209ENST00000450148 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
MSH5-209ENST00000450148 CD58P19256 250 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 BMP6P22004 513 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 CNR2P34972 360 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 MESP2Q0VG99 397 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 NR1H3Q13133 447 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 DHCR24Q15392 516 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 LPAL2Q16609 132 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
MSH5-209ENST00000450148 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 ARID3AQ99856 593 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 HINFPQ9BQA5 517 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
MSH5-209ENST00000450148 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
MSH5-209ENST00000450148 SLC16A3O15427 465 aaKnown RBP13.06□□□□□ -0.32
MSH5-209ENST00000450148 ATG13O75143 517 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SMC2O95347 1197 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SLC6A11P48066 632 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 PXNP49023 591 aaPredicted RBP13.06□□□□□ -0.32
MSH5-209ENST00000450148 KIF11P52732 1056 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 RAD23BP54727 409 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
MSH5-209ENST00000450148 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
MSH5-209ENST00000450148 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 SYT13Q7L8C5 426 aa13.06□□□□□ -0.32
MSH5-209ENST00000450148 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms