RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SNX11Q9Y5W9 270 aa13.5□□□□□ -0.25
AC004540.1-204ENST00000449537 SLC16A4O15374 487 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 TULP3O75386 442 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 SLC7A9P82251 487 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 KYAT1Q16773 422 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 TBC1D25Q3MII6 688 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 ZPBP2Q6X784 338 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 TRIM4Q9C037 500 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 FAM117AQ9C073 453 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 ITM2CQ9NQX7 267 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 TRPM5Q9NZQ8 1165 aa13.49□□□□□ -0.25
AC004540.1-204ENST00000449537 AHCTF1Q8WYP5 2266 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 TEP1Q99973 2627 aaKnown RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 E2F8A0AVK6 867 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 KCNK3O14649 394 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 RFPL3O75679 317 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 GP1BBP13224 206 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 KRT10P13645 584 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 MUTP22033 750 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 OXTRP30559 389 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 TAF6P49848 677 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 CCT8P50990 548 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 AFF3P51826 1226 aaKnown RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 NR5A1Q13285 461 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 TEAD4Q15561 434 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 HES3Q5TGS1 186 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 SCN4BQ8IWT1 228 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 CD302Q8IX05 232 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 ETFBKMTQ8IXQ9 262 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 GABRG3Q99928 467 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 NTPCRQ9BSD7 190 aaKnown RBP13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 RNF38Q9H0F5 515 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 SMPD4Q9NXE4 827 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 CFAP97Q9P2B7 532 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 ANKRD6Q9Y2G4 727 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 CPQQ9Y646 472 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 MYLKQ15746 1914 aa13.48□□□□□ -0.25
AC004540.1-204ENST00000449537 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 ENC1O14682 589 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 TRIM66O15016 1216 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 HIP1RO75146 1068 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 ADRB2P07550 413 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 ENOX2Q16206 610 aaKnown RBP13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 DAW1Q8N136 415 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 KCNB2Q92953 911 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 HAPLN2Q9GZV7 340 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 C17orf75Q9HAS0 396 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 KCNG1Q9UIX4 513 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 SCN1AP35498 2009 aa13.47□□□□□ -0.25
AC004540.1-204ENST00000449537 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 KPNA7A9QM74 516 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 LDOC1O95751 146 aaPredicted RBP13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 KRT2P35908 639 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 VAC14Q08AM6 782 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 PDIA5Q14554 519 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 ANO4Q32M45 955 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 FBXL19Q6PCT2 694 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 OTUB2Q96DC9 234 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 ACBD6Q9BR61 282 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 NUP58Q9BVL2 599 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 USP36Q9P275 1121 aaKnown RBP13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 GTF3C4Q9UKN8 822 aa13.46□□□□□ -0.25
AC004540.1-204ENST00000449537 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 H0Y8X5 98 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 GFRA2O00451 464 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 WNT7AO00755 349 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 TRIM24O15164 1050 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 HOXC11O43248 304 aaPredicted RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 DFNA5O60443 496 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 ABL1P00519 1130 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 PSMA5P28066 241 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 SMTNP53814 917 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 PCBP4P57723 403 aaKnown RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 NFATC3Q12968 1075 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms