RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GSCP56915 257 aaPredicted RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 RNASE9P60153 205 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 SLC6A3Q01959 620 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 RAB41Q5JT25 222 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 PDE12Q6L8Q7 609 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 DENND5BQ6ZUT9 1274 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 RBM23Q86U06 439 aaKnown RBP15.38■□□□□ 0.05
TNF-208ENST00000449264 NUP93Q8N1F7 819 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 SLC7A14Q8TBB6 771 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 FAM149B1Q96BN6 582 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 MCRS1Q96EZ8 462 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 BTBD6Q96KE9 485 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 LMAN2LQ9H0V9 348 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 ANAPC7Q9UJX3 599 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 FBXW11Q9UKB1 542 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
TNF-208ENST00000449264 TCRBV5S1A1TA0A578 114 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 TMEM110-MUSTN1A8MSY1 372 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 PER2O15055 1255 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 KIF5CO60282 957 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 FBXO21O94952 628 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 ZBED1O96006 694 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 KRT3P12035 628 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 ALDH1A3P47895 512 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 CLCN4P51793 760 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 RPL7AP62424 266 aaKnown RBP15.37■□□□□ 0.05
TNF-208ENST00000449264 TWF1Q12792 350 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 MTMR3Q13615 1198 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 TAF5Q15542 800 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 ADGRD2Q7Z7M1 963 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 ZDHHC17Q8IUH5 632 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 TCEAL8Q8IYN2 117 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 EMC1Q8N766 993 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 ZNF576Q9H609 170 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 CNGB3Q9NQW8 809 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 HSFX1Q9UBD0 423 aa15.37■□□□□ 0.05
TNF-208ENST00000449264 MAGED2Q9UNF1 606 aaPredicted RBP15.37■□□□□ 0.05
TNF-208ENST00000449264 A0A1W2PPC1 479 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 CLASP2O75122 1294 aaKnown RBP15.36■□□□□ 0.05
TNF-208ENST00000449264 C8AP07357 584 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 DAOAP59103 153 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 USP46P62068 366 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 MRPS5P82675 430 aaKnown RBP15.36■□□□□ 0.05
TNF-208ENST00000449264 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
TNF-208ENST00000449264 LRIT3Q3SXY7 679 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 KREMEN2Q8NCW0 462 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 FEZF2Q8TBJ5 459 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 SPATA17Q96L03 361 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 GOLPH3Q9H4A6 298 aa15.36■□□□□ 0.05
TNF-208ENST00000449264 SIGLEC16A6NMB1 481 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 SLC38A8A6NNN8 435 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 PTPROQ16827 1216 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 ZNF569Q5MCW4 686 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 PPP1R15BQ5SWA1 713 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 LILRA6Q6PI73 481 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
TNF-208ENST00000449264 TPCN2Q8NHX9 752 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 ALS2CR12Q96Q35 445 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 MAFFQ9ULX9 164 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 GRID2IPA4D2P6 1211 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 YJEFN3A6XGL0 299 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 E7ENQ6 273 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
TNF-208ENST00000449264 BUB1BO60566 1050 aaPredicted RBP15.35■□□□□ 0.05
TNF-208ENST00000449264 PALMO75781 387 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 MTA2O94776 668 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 RTN3O95197 1032 aaPredicted RBP15.35■□□□□ 0.05
TNF-208ENST00000449264 LRG1P02750 347 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 EPCAMP16422 314 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 YWHAQP27348 245 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 RFC1P35251 1148 aaPredicted RBP15.35■□□□□ 0.05
TNF-208ENST00000449264 FLT3P36888 993 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 GNG11P61952 73 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 MESDQ14696 234 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 TCEAL1Q15170 157 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 TAF12Q16514 161 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 EFHC1Q5JVL4 640 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 CCDC149Q6ZUS6 474 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 HFE2Q6ZVN8 426 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 SLC26A9Q7LBE3 791 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 FBXO32Q969P5 355 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 FBXO44Q9H4M3 255 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 TLE6Q9H808 572 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 USP3Q9Y6I4 520 aa15.35■□□□□ 0.05
TNF-208ENST00000449264 TMEM191CA6NGB0 347 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 MYO1FO00160 1098 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 HSF2BPO75031 334 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 NRIP1P48552 1158 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 EPHB3P54753 998 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 PLD1Q13393 1074 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 BHLHA9Q7RTU4 235 aa15.34■□□□□ 0.05
TNF-208ENST00000449264 SLC35F6Q8N357 371 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms