RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 RPL26L1Q9UNX3 145 aaKnown RBP16.47■□□□□ 0.23
CHRD-205ENST00000448472 ATXN3P54252 364 aaPredicted RBP16.47■□□□□ 0.23
CHRD-205ENST00000448472 TRIP10Q15642 601 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 SNRNP48Q6IEG0 339 aaKnown RBP16.47■□□□□ 0.23
CHRD-205ENST00000448472 ST13P4Q8IZP2 240 aaPredicted RBP16.47■□□□□ 0.23
CHRD-205ENST00000448472 SKA1Q96BD8 255 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 CGRRF1Q99675 332 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 KCNK13Q9HB14 408 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 KRT82Q9NSB4 513 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
CHRD-205ENST00000448472 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 C6orf222P0C671 652 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 MIPP30301 263 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHRD-205ENST00000448472 DRICH1Q6PGQ1 229 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 TRIM42Q8IWZ5 723 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.232e-8■■■□□ 19
CHRD-205ENST00000448472 UBA3Q8TBC4 463 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PPP1R36Q96LQ0 422 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PPP1R16BQ96T49 567 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PDP2Q9P2J9 529 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PPM1HQ9ULR3 514 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 KRT38O76015 456 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PTPN20Q4JDL3 420 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 LPCAT4Q643R3 524 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 NIPA1Q7RTP0 329 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 POLNQ7Z5Q5 900 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 MMP19Q99542 508 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 CENPKQ9BS16 269 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 NIF3L1Q9GZT8 377 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 SLC7A8Q9UHI5 535 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 POLIQ9UNA4 740 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 RIPK3Q9Y572 518 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 ABLIM1O14639 778 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 LYPLA1O75608 230 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 ZMPSTE24O75844 475 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 OSBPP22059 807 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 RPL10AP62906 217 aaKnown RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 PDE1BQ01064 536 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 MED21Q13503 144 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 OR52E8Q6IFG1 317 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 ATXN7L3BQ96GX2 97 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
CHRD-205ENST00000448472 APOBEC2Q9Y235 224 aaKnown RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 FARP1Q9Y4F1 1045 aaPredicted RBP16.46■□□□□ 0.23
CHRD-205ENST00000448472 A8MXQ7 604 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 CXorf49A8MYA2 514 aaPredicted RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 PRPSAP2O60256 369 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 DUOXA2Q1HG44 320 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 TCHHL1Q5QJ38 904 aaPredicted RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 DENND5BQ6ZUT9 1274 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 SLC44A1Q8WWI5 657 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 NTPCRQ9BSD7 190 aaKnown RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 TLE6Q9H808 572 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 M0QYV0 167 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 KCNA4P22459 653 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 PTGER2P43116 358 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 PEX6Q13608 980 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 TRMT5Q32P41 509 aaKnown RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 DNAL1Q4LDG9 190 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 LRRC23Q53EV4 343 aaPredicted RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 BBS12Q6ZW61 710 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 PANX3Q96QZ0 392 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 ECSITQ9BQ95 431 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 WDR83Q9BRX9 315 aaKnown RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 VCX3AQ9NNX9 186 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 TXNDC16Q9P2K2 825 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 ARHGAP28Q9P2N2 729 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 USP18Q9UMW8 372 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 BCAR1P56945 870 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 MMEL1Q495T6 779 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 C15orf39Q6ZRI6 1047 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 SDCCAG8Q86SQ7 713 aaPredicted RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 FAM136AQ96C01 138 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 NMD3Q96D46 503 aaKnown RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
CHRD-205ENST00000448472 DNAJC16Q9Y2G8 782 aa16.45■□□□□ 0.22
CHRD-205ENST00000448472 INO80B-WBP1J3KQ70 363 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 TNNC2P02585 160 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 RGS7P49802 495 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 TAP1Q03518 808 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 INO80BQ9C086 356 aaPredicted RBP16.44■□□□□ 0.22
CHRD-205ENST00000448472 HAPLN2Q9GZV7 340 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 KLC2Q9H0B6 622 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 PROCP04070 461 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 C15orf59Q2T9L4 293 aaPredicted RBP16.44■□□□□ 0.22
CHRD-205ENST00000448472 PPP4R1Q8TF05 950 aa16.44■□□□□ 0.22
CHRD-205ENST00000448472 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms