RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 LMAN1LQ9HAT1 526 aa25.4■■□□□ 1.66
MRPL28-205ENST00000447696 PNPLA8Q9NP80 782 aa25.4■■□□□ 1.66
MRPL28-205ENST00000447696 CISHQ9NSE2 258 aa25.4■■□□□ 1.66
MRPL28-205ENST00000447696 KIAA1468Q9P260 1216 aa25.4■■□□□ 1.66
MRPL28-205ENST00000447696 ADORA2BP29275 332 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 AMPD2Q01433 879 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 IFRD2Q12894 506 aaPredicted RBP25.39■■□□□ 1.66
MRPL28-205ENST00000447696 TXNDC11Q6PKC3 985 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 GPR161Q8N6U8 529 aaKnown RBP25.39■■□□□ 1.66
MRPL28-205ENST00000447696 SCAMP5Q8TAC9 235 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 TTC8Q8TAM2 541 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 FBXO44Q9H4M3 255 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 EBF3Q9H4W6 596 aa25.39■■□□□ 1.66
MRPL28-205ENST00000447696 BEST1O76090 585 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 GNA14O95837 355 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 ZDHHC11BP0C7U3 371 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 FMO5P49326 533 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 TUBP50607 506 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 MAP3K7CLP57077 242 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 DGKKQ5KSL6 1271 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 TRIM68Q6AZZ1 485 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 CLEC20AQ6ZU45 233 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 CPA6Q8N4T0 437 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 ATP2A3Q93084 1043 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 ARID3AQ99856 593 aa25.38■■□□□ 1.65
MRPL28-205ENST00000447696 PRMT8Q9NR22 394 aaPredicted RBP25.38■■□□□ 1.65
MRPL28-205ENST00000447696 DUS2Q9NX74 493 aaKnown RBP25.38■■□□□ 1.65
MRPL28-205ENST00000447696 HELZP42694 1942 aaKnown RBP25.37■■□□□ 1.65
MRPL28-205ENST00000447696 ABL1P00519 1130 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 ARSAP15289 507 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 IFNAR2P48551 515 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 YWHAEP62258 255 aaKnown RBP25.37■■□□□ 1.65
MRPL28-205ENST00000447696 MTAPQ13126 283 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 CLEC17AQ6ZS10 378 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 DDX42Q86XP3 938 aaKnown RBP eCLIP25.37■■□□□ 1.65
MRPL28-205ENST00000447696 TATDN2Q93075 761 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 RNF38Q9H0F5 515 aa25.37■■□□□ 1.65
MRPL28-205ENST00000447696 DNAH14Q0VDD8 3507 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 CACNA1IQ9P0X4 2223 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 TPRP12270 2363 aaKnown RBP25.36■■□□□ 1.65
MRPL28-205ENST00000447696 LEFTY2O00292 366 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 P4HA2O15460 535 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 TBXAS1P24557 533 aaPredicted RBP25.36■■□□□ 1.65
MRPL28-205ENST00000447696 MARSP56192 900 aaKnown RBP25.36■■□□□ 1.65
MRPL28-205ENST00000447696 CUL2Q13617 745 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 CAMK4Q16566 473 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 HECTD3Q5T447 861 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 SYNPOQ8N3V7 929 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 SLC4A11Q8NBS3 891 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 TMEM176AQ96HP8 235 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 CPQQ9Y646 472 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 WNT6Q9Y6F9 365 aa25.36■■□□□ 1.65
MRPL28-205ENST00000447696 OTOL1A6NHN0 477 aaPredicted RBP25.35■■□□□ 1.65
MRPL28-205ENST00000447696 HHLA1C9JL84 531 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 FGFR1OPO95684 399 aaKnown RBP25.35■■□□□ 1.65
MRPL28-205ENST00000447696 RAD23BP54727 409 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 ZXDBP98169 803 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 CETN1Q12798 172 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 CCINQ13939 588 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 PON2Q15165 354 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 EML3Q32P44 896 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 ZNF394Q53GI3 561 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 TRIM59Q8IWR1 403 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 EXOC4Q96A65 974 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 HEXIM2Q96MH2 286 aaKnown RBP25.35■■□□□ 1.65
MRPL28-205ENST00000447696 DUSP16Q9BY84 665 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 ECT2Q9H8V3 914 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 GMIPQ9P107 970 aa25.35■■□□□ 1.65
MRPL28-205ENST00000447696 CHORDC1Q9UHD1 332 aaPredicted RBP25.35■■□□□ 1.65
MRPL28-205ENST00000447696 TRDMT1O14717 391 aaKnown RBP25.34■■□□□ 1.65
MRPL28-205ENST00000447696 CCR3P51677 355 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 STX17P56962 302 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 PPP1R26Q5T8A7 1209 aaPredicted RBP25.34■■□□□ 1.65
MRPL28-205ENST00000447696 ARHGAP17Q68EM7 881 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 SPEM1Q8N4L4 309 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 SUMF1Q8NBK3 374 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 TTC16Q8NEE8 873 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 CLSTN2Q9H4D0 955 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 TLR8Q9NR97 1041 aaKnown RBP25.34■■□□□ 1.65
MRPL28-205ENST00000447696 RWDD2AQ9UIY3 292 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 SCML2Q9UQR0 700 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 FRYLO94915 3013 aa25.34■■□□□ 1.65
MRPL28-205ENST00000447696 SLC9A3R1O14745 358 aaPredicted RBP25.33■■□□□ 1.65
MRPL28-205ENST00000447696 COCHO43405 550 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 NFATC1O95644 943 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 MBL2P11226 248 aaPredicted RBP25.33■■□□□ 1.65
MRPL28-205ENST00000447696 CSTF1Q05048 431 aaKnown RBP25.33■■□□□ 1.65
MRPL28-205ENST00000447696 NR1H3Q13133 447 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 PPP2R5DQ14738 602 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 TMEM196Q5HYL7 178 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 GPRIN1Q7Z2K8 1008 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 NELL1Q92832 810 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 CHFRQ96EP1 664 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 SRRTQ9BXP5 876 aaKnown RBP25.33■■□□□ 1.65
MRPL28-205ENST00000447696 FAM126AQ9BYI3 521 aaPredicted RBP25.33■■□□□ 1.65
MRPL28-205ENST00000447696 SMPD4Q9NXE4 827 aa25.33■■□□□ 1.65
MRPL28-205ENST00000447696 GJA4P35212 333 aa25.32■■□□□ 1.64
MRPL28-205ENST00000447696 GRSF1Q12849 480 aaKnown RBP eCLIP25.32■■□□□ 1.64
MRPL28-205ENST00000447696 UBR7Q8N806 425 aa25.32■■□□□ 1.64
MRPL28-205ENST00000447696 SECISBP2LQ93073 1101 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms