RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RDH12Q96NR8 316 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SETDB2Q96T68 719 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 MEIS3Q99687 375 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PHTF1Q9UMS5 762 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 HECW2Q9P2P5 1572 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 A0A0G2JPF8 293 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 C2orf71A6NGG8 1288 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ERVV-2B6SEH9 535 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 HNRNPCL3B7ZW38 293 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 LOC110117498-PIK3R3F6TDL0 507 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ACOX3O15254 700 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 RAD51BO15315 384 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZMYND10O75800 440 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 APOA4P06727 396 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 HNRNPCL4P0DMR1 293 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 RALBP11234 206 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FGFR2P21802 821 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 MARCKSP29966 332 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 CBX5P45973 191 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 APLP1P51693 650 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 STX4Q12846 297 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 LAMC2Q13753 1193 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 CTC1Q2NKJ3 1217 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 RRAGAQ7L523 313 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 CHSY1Q86X52 802 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 C8orf59Q8N0T1 100 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 KDM1BQ8NB78 822 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PI4K2BQ8TCG2 481 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FRS2Q8WU20 508 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PIK3R3Q92569 461 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PROX1Q92786 737 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SYMPKQ92797 1274 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 DDX17Q92841 729 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 EHD4Q9H223 541 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 TAB2Q9NYJ8 693 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PSMC3IPQ9P2W1 217 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 SPO11Q9Y5K1 396 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 MN1Q10571 1320 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 CPDO75976 1380 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ADAMTS12P58397 1594 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FRMPD1Q5SYB0 1578 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 DEPDC5O75140 1603 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 LINC00854A0A1B0GVQ3 168 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FAM86C2PA6NEL3 165 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 OR6C65A6NJZ3 312 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 KLF11O14901 512 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZBTB39O15060 712 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZBTB5O15062 677 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 RAB3AP20336 220 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ATP6V1E1P36543 226 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SERPINB9P50453 376 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZNF45Q02386 682 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FKBP4Q02790 459 aaKnown RBP eCLIP3.02□□□□□ -1.931e-6■■■■■ 33.9
CHD9-203ENST00000447540 ANKRD40Q6AI12 368 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 LRRC8EQ6NSJ5 796 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PRMT9Q6P2P2 845 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 MACC1Q6ZN28 852 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 NEK8Q86SG6 692 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZSCAN29Q8IWY8 852 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 FAM20CQ8IXL6 584 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 FCGR1BQ92637 280 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SLCO2A1Q92959 643 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SECISBP2Q96T21 854 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 NUSAP1Q9BXS6 441 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 DNAJC11Q9NVH1 559 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PCYOX1Q9UHG3 505 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 NUP214P35658 2090 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 A2MP01023 1474 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 KCNN4O15554 427 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 COX4I1P13073 169 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ARL1P40616 181 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 TRAF2Q12933 501 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 CLCA4Q14CN2 919 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 LVRNQ6Q4G3 990 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 TSEN2Q8NCE0 465 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 KBTBD8Q8NFY9 601 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ZKSCAN3Q9BRR0 538 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 TRABDQ9H4I3 376 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PLEKHA5Q9HAU0 1116 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 WARS2Q9UGM6 360 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 ENOPH1Q9UHY7 261 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ING4Q9UNL4 249 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 RUVBL2Q9Y230 463 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 KIAA0556O60303 1618 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 ARHGAP23Q9P227 1491 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 TNNC2P02585 160 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 MT-ND3P03897 115 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 INHBAP08476 426 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 CTRB1P17538 263 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 GTF2H1P32780 548 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PHKA1P46020 1223 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 PLIN5Q00G26 463 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 SLC29A2Q14542 456 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 EMC2Q15006 297 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 UBE3CQ15386 1083 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 UAP1Q16222 522 aaPredicted RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 FBXO43Q4G163 708 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 IFIT1BQ5T764 474 aaKnown RBP3.02□□□□□ -1.93
CHD9-203ENST00000447540 HES5Q5TA89 166 aa3.02□□□□□ -1.93
CHD9-203ENST00000447540 DDI2Q5TDH0 399 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms