RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 AP4E1Q9UPM8 1137 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 NFASCO94856 1347 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 FCHO1O14526 889 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 MCF2P10911 925 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 EPHB2P29323 1055 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 TAF6P49848 677 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 MYLK4Q86YV6 388 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 SLC7A14Q8TBB6 771 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 NRBF2Q96F24 287 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 MRPL1Q9BYD6 325 aaKnown RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 TYW5A2RUC4 315 aaKnown RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 SPDYE16A6NNV3 312 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 DCDC2CA8MYV0 355 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 TOMM70O94826 608 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 CBX6O95503 412 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 GLRA2P23416 452 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 SKIV2L2P42285 1042 aaKnown RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 BCAT1P54687 386 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 KCNJ2P63252 427 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 DSG1Q02413 1049 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 DPYSL3Q14195 570 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 POLNQ7Z5Q5 900 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 C12orf50Q8NA57 414 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 GTF3C2Q8WUA4 911 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 RNF103-CHMP3A0A140T963 221 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 HMGCRP04035 888 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 UGCGQ16739 394 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ILKAPQ9H0C8 392 aaPredicted RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ANLNQ9NQW6 1124 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 NR2E1Q9Y466 385 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 GSTA4O15217 222 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 KRT16P08779 473 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 EEF1B2P24534 225 aaKnown RBP17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ATP13A4Q4VNC1 1196 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ASAP3Q8TDY4 903 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 LRRC39Q96DD0 335 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 CCDC138Q96M89 665 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 RNPEPL1Q9HAU8 725 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 ORC6Q9Y5N6 252 aa17.24■□□□□ 0.35
TCOF1-206ENST00000445265 FKBP6O75344 327 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TAS2R40P59535 323 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 BMPR2Q13873 1038 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TSPAN17Q96FV3 270 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TRDMT1O14717 391 aaKnown RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 SLC12A1Q13621 1099 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TTC27Q6P3X3 843 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 ATPAF2Q8N5M1 289 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 OXNAD1Q96HP4 312 aaPredicted RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 PPP1R36Q96LQ0 422 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 LRRC40Q9H9A6 602 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TSPAN16Q9UKR8 245 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 MOCS2O96007 188 aaPredicted RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 SERPINB3P29508 390 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 CDK16Q00536 496 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 KCTD19Q17RG1 926 aaPredicted RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 BBS12Q6ZW61 710 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 SP110Q9HB58 689 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 FNDC3AQ9Y2H6 1198 aaKnown RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 LRP6O75581 1613 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 ALOX15BO15296 676 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 TIMM44O43615 452 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 ATP5BP06576 529 aaKnown RBP17.23■□□□□ 0.35
TCOF1-206ENST00000445265 RARBP10826 455 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 ETS1P14921 441 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 CYP2F1P24903 491 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 PTGIRP43119 386 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 SLC39A10Q9ULF5 831 aa17.23■□□□□ 0.35
TCOF1-206ENST00000445265 hCG_1818297A0A087WSY0 165 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 UBTFL6P0CB48 400 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 PPARGP37231 505 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 SERPINB8P50452 374 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 LINC00523Q86TU6 105 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 GIPC2Q8TF65 315 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 TEKT4Q8WW24 435 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 LENG9Q96B70 501 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 POLIQ9UNA4 740 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 TCRBV7S2A1N4TA0A589 114 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 H2AFYO75367 372 aaKnown RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 MICAL2O94851 1124 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 CYP2C9P11712 490 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 RFC1P35251 1148 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 ARPP19P56211 112 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 RNF168Q8IYW5 571 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 PRCCQ92733 491 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms