RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 IRX4P78413 519 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 MRPS21P82921 87 aaKnown RBP15.07■□□□□ 0
SMARCAL1-210ENST00000445153 UNC13DQ70J99 1090 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 NUP93Q8N1F7 819 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 PHTF2Q8N3S3 785 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 IQUBQ8NA54 791 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 SPRYD3Q8NCJ5 442 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 FNBP1Q96RU3 617 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 ELOVL4Q9GZR5 314 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 SDCBP2Q9H190 292 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 CUEDC2Q9H467 287 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 SMYD3Q9H7B4 428 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 SLC39A2Q9NP94 309 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 HCN2Q9UL51 889 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 LAMA1P25391 3075 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 THADAQ6YHU6 1953 aa15.07■□□□□ 0
SMARCAL1-210ENST00000445153 NUP205Q92621 2012 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
SMARCAL1-210ENST00000445153 TRIM24O15164 1050 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 CUTAO60888 179 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 VNN1O95497 513 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 TOP3BO95985 862 aaKnown RBP15.06■□□□□ 0
SMARCAL1-210ENST00000445153 ZSCAN22P10073 491 aaPredicted RBP15.06■□□□□ 0
SMARCAL1-210ENST00000445153 YWHAQP27348 245 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 P2RY2P41231 377 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 AMPD3Q01432 767 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 CUL4BQ13620 913 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 LY6G5CQ5SRR4 150 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 GRAMD1CQ8IYS0 662 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 KIAA1958Q8N8K9 716 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 CCDC26Q8TAB7 109 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 SLITRK1Q96PX8 696 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 CCSER2Q9H7U1 834 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 TMEM74BQ9NUR3 256 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 IL37Q9NZH6 218 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 EHD2Q9NZN4 543 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 MBD1Q9UIS9 605 aaPredicted RBP15.06■□□□□ 0
SMARCAL1-210ENST00000445153 PCDHA7Q9UN72 937 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
SMARCAL1-210ENST00000445153 LRRIQ3A6PVS8 624 aaPredicted RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 SLC9A3R1O14745 358 aaPredicted RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 POLR2DO15514 142 aaKnown RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 BEST1O76090 585 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 C4BPAP04003 597 aaKnown RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ADH5P11766 374 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ATICP31939 592 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 EIF2DP41214 584 aaKnown RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 PTGER3P43115 390 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 DHPSP49366 369 aaPredicted RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 NOVA1P51513 510 aaKnown RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 SNRPFP62306 86 aaKnown RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 KDSRQ06136 332 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 TRPC3Q13507 836 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 BMT2Q1RMZ1 405 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 FAM35AQ86V20 835 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ETFBKMTQ8IXQ9 262 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 C12orf56Q8IXR9 622 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 NAT16Q8N8M0 369 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ZMIZ2Q8NF64 920 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 FBXO32Q969P5 355 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
SMARCAL1-210ENST00000445153 VRTNQ9H8Y1 702 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 ARHGEF4Q9NR80 690 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 WASF3Q9UPY6 502 aa15.05■□□□□ -0
SMARCAL1-210ENST00000445153 UBE4BO95155 1302 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 E2F8A0AVK6 867 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 KHNYNO15037 678 aaKnown RBP15.04■□□□□ -0
SMARCAL1-210ENST00000445153 APODP05090 189 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 ZDHHC11BP0C7U3 371 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SPINK2P20155 84 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 GRIA2P42262 883 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 AFMP43652 599 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SLC5A3P53794 718 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 DLG4P78352 724 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 CLDN10P78369 228 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 DNM1Q05193 864 aaKnown RBP15.04■□□□□ -0
SMARCAL1-210ENST00000445153 ORC1Q13415 861 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
SMARCAL1-210ENST00000445153 MAP7D1Q3KQU3 841 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SH3PXD2AQ5TCZ1 1133 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SNX30Q5VWJ9 437 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 ARMCX6Q7L4S7 300 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 CYP2U1Q7Z449 544 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 TMEM25Q86YD3 366 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 BBS7Q8IWZ6 715 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 TMEFF1Q8IYR6 380 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 FUKQ8N0W3 1084 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 PARD3BQ8TEW8 1205 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 PIGKQ92643 395 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
SMARCAL1-210ENST00000445153 SMOQ99835 787 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 GMIPQ9P107 970 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 TBC1D14Q9P2M4 693 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 HMGXB4Q9UGU5 601 aa15.04■□□□□ -0
SMARCAL1-210ENST00000445153 RALYQ9UKM9 306 aaKnown RBP15.04■□□□□ -0
SMARCAL1-210ENST00000445153 FAM92AA1XBS5 289 aa15.03■□□□□ -0
SMARCAL1-210ENST00000445153 KLRC4O43908 158 aa15.03■□□□□ -0
SMARCAL1-210ENST00000445153 GREM1O60565 184 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms