RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 MAN2B1O00754 1011 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 NCAM2O15394 837 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 SERPINC1P01008 464 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 GLULP15104 373 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 GNA15P30679 374 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 GDI1P31150 447 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 NR1H3Q13133 447 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 ZSCAN23Q3MJ62 389 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 SNX30Q5VWJ9 437 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 TXNDC8Q6A555 127 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 NEK11Q8NG66 645 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 SHC3Q92529 594 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 HSFY1Q96LI6 401 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 ZSWIM3Q96MP5 696 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 NELL2Q99435 816 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 MIS12Q9H081 205 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.91□□□□□ -0.34
LTBR-204ENST00000444814 COL6A3P12111 3177 aa12.91□□□□□ -0.34
LTBR-204ENST00000444814 TNFRSF10BO14763 440 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 THAP12O43422 761 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 FBXO21O94952 628 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 CFHP08603 1231 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 TCF3P15923 654 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 KRT9P35527 623 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 PLA2G4AP47712 749 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 KIF11P52732 1056 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 ZNF132P52740 706 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 CACNA2D1P54289 1103 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 MLLT6P55198 1093 aaPredicted RBP12.9□□□□□ -0.34
LTBR-204ENST00000444814 PDGFRLQ15198 375 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 KLHDC7AQ5VTJ3 777 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 VITQ6UXI7 678 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 ZMIZ2Q8NF64 920 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 KREMEN1Q96MU8 473 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 PRRX2Q99811 253 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 C8orf33Q9H7E9 229 aaPredicted RBP12.9□□□□□ -0.34
LTBR-204ENST00000444814 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 ARHGEF3Q9NR81 526 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
LTBR-204ENST00000444814 CLIC5Q9NZA1 410 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 STRIP2Q9ULQ0 834 aa12.9□□□□□ -0.34
LTBR-204ENST00000444814 MBL2P11226 248 aaPredicted RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 UCHL3P15374 230 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 ZNF18P17022 549 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 FCARP24071 287 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 VIPR2P41587 438 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 IFNAR2P48551 515 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 NUBP1P53384 320 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 USP46P62068 366 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 GPC5P78333 572 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 SLC7A9P82251 487 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 FCHO2Q0JRZ9 810 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 SYCP1Q15431 976 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 TMEM150AQ86TG1 271 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 STK32AQ8WU08 396 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 KAT5Q92993 513 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 STK33Q9BYT3 514 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 CYLDQ9NQC7 956 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 GMIPQ9P107 970 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 NAGPAQ9UK23 515 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.35
LTBR-204ENST00000444814 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.35
LTBR-204ENST00000444814 TADA3O75528 432 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 BEST1O76090 585 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 ZBED1O96006 694 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 TKTL1P51854 596 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 KPNA1P52294 538 aaPredicted RBP12.89□□□□□ -0.35
LTBR-204ENST00000444814 GRM2Q14416 872 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 DRAP1Q14919 205 aaPredicted RBP12.89□□□□□ -0.35
LTBR-204ENST00000444814 NCAPHQ15003 741 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
LTBR-204ENST00000444814 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 CACNA2D4Q7Z3S7 1137 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 SIX5Q8N196 739 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 SCML4Q8N228 414 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 FBXL6Q8N531 539 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 ZNF276Q8N554 614 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 RNF139Q8WU17 664 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 IRGQQ8WZA9 623 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 USP13Q92995 863 aaPredicted RBP12.89□□□□□ -0.35
LTBR-204ENST00000444814 ATP2A3Q93084 1043 aa12.89□□□□□ -0.35
LTBR-204ENST00000444814 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms