RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SCAPQ12770 1279 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.054e-6■□□□□ 10.9
HMGN1-208ENST00000443046 SLC41A1Q8IVJ1 513 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 OR2I1PQ8NGU4 316 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 MYCBPAPQ8TBZ2 947 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 ADAMTS14Q8WXS8 1223 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 DNAJC19Q96DA6 116 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 ZFRQ96KR1 1074 aaKnown RBP15.36■□□□□ 0.05
HMGN1-208ENST00000443046 ACCSQ96QU6 501 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 MTMR12Q9C0I1 747 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 SMPD4Q9NXE4 827 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 TBC1D14Q9P2M4 693 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 SEL1LQ9UBV2 794 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 EXOC7Q9UPT5 735 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 STARD13Q9Y3M8 1113 aa15.36■□□□□ 0.05
HMGN1-208ENST00000443046 IGHV1OR15-9A0A0B4J2B8 117 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 A0A1W2PQF6 199 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 F8VP50 259 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 SCAMP3O14828 347 aaKnown RBP15.35■□□□□ 0.05
HMGN1-208ENST00000443046 HOXC11O43248 304 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-208ENST00000443046 KRT19P08727 400 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 GAD2Q05329 585 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 KDSRQ06136 332 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 TAF10Q12962 218 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 TRIP6Q15654 476 aaKnown RBP15.35■□□□□ 0.05
HMGN1-208ENST00000443046 LY6G5CQ5SRR4 150 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 PDZD3Q86UT5 571 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-208ENST00000443046 PGBD3Q8N328 593 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 DEFB119Q8N690 84 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 OTUB2Q96DC9 234 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 HPDLQ96IR7 371 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 CBWD1Q9BRT8 395 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 MRPL44Q9H9J2 332 aaKnown RBP15.35■□□□□ 0.05
HMGN1-208ENST00000443046 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 CALCOCO1Q9P1Z2 691 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 KIF3AQ9Y496 699 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 NME7Q9Y5B8 376 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 PTPRJQ12913 1337 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 PTPRBP23467 1997 aa15.35■□□□□ 0.05
HMGN1-208ENST00000443046 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 SH3BP5O60239 455 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 TULP3O75386 442 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 PDGFRBP09619 1106 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 ANXA13P27216 316 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 CASP5P51878 434 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 CACNA2D1P54289 1103 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 CYP27A1Q02318 531 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 C19orf48Q6RUI8 117 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 CCNI2Q6ZMN8 369 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-208ENST00000443046 DYMQ7RTS9 669 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 TRMT11Q7Z4G4 463 aaKnown RBP15.34■□□□□ 0.05
HMGN1-208ENST00000443046 MIB1Q86YT6 1006 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 ZNF513Q8N8E2 541 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-208ENST00000443046 OR5B17Q8NGF7 314 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 ZNF419Q96HQ0 510 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-208ENST00000443046 CAMK1GQ96NX5 476 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 OLFML3Q9NRN5 406 aa15.34■□□□□ 0.05
HMGN1-208ENST00000443046 TBC1D3BA6NDS4 549 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 ZNF217O75362 1048 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 SYPP08247 313 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 FAM163BP0C2L3 166 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 TMEM191BP0C7N4 346 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 FTH1P19P0C7X4 201 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 MBL2P11226 248 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-208ENST00000443046 GAP43P17677 238 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 SNX30Q5VWJ9 437 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.04
HMGN1-208ENST00000443046 USP49Q70CQ1 688 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 GLRX5Q86SX6 157 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 TERB1Q8NA31 727 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 FGFBP2Q9BYJ0 223 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 DEC1Q9P2X7 70 aa15.33■□□□□ 0.04
HMGN1-208ENST00000443046 FRMD3A2A2Y4 597 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 TRIM24O15164 1050 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 COCHO43405 550 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 CBFA2T3O75081 653 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 TACC1O75410 805 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 BMP15O95972 392 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 HOXB2P14652 356 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 NTSR1P30989 418 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 COL28A1Q2UY09 1125 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-208ENST00000443046 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 NAT16Q8N8M0 369 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 TRIML1Q8N9V2 468 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 OVCA2Q8WZ82 227 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 ANKRD36BP1Q96IX9 119 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 EPSTI1Q96J88 318 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 SLITRK1Q96PX8 696 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 MRPL45Q9BRJ2 306 aaKnown RBP15.32■□□□□ 0.04
HMGN1-208ENST00000443046 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
HMGN1-208ENST00000443046 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms