RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DENND5BQ6ZUT9 1274 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 GALNT6Q8NCL4 622 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 HTRA1Q92743 480 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 MPP6Q9NZW5 540 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SERPINB13Q9UIV8 391 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 USP17L3A6NCW0 530 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 USP17L4A6NCW7 530 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 CCDC182A6NF36 153 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 H2AFYO75367 372 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 STIP1P31948 543 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 SLC1A6P48664 564 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 TYSND1Q2T9J0 566 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 USP17L1Q7RTZ2 530 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 C16orf62Q7Z3J2 963 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 TRABD2AQ86V40 505 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SPATA18Q8TC71 538 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 PSPC1Q8WXF1 523 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 CPA5Q8WXQ8 436 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 PLEKHA8Q96JA3 519 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 FAM20AQ96MK3 541 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 ZBTB1Q9Y2K1 713 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SIK3Q9Y2K2 1263 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 WBP11Q9Y2W2 641 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 ZMYM2Q9UBW7 1377 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 HTR3EA5X5Y0 456 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 MYO1GB0I1T2 1018 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 CCRL2O00421 344 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 FBP2O00757 339 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 CPA3P15088 417 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 FGFR3P22607 806 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 TBXAS1P24557 533 aaPredicted RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 KCNQ4P56696 695 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 GTF2IP78347 998 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 IL5RAQ01344 420 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 PIGHQ14442 188 aaPredicted RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 USP10Q14694 798 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 UGP2Q16851 508 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SMU1Q2TAY7 513 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 ZC2HC1CQ53FD0 456 aaPredicted RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 PDZK1Q5T2W1 519 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 CYP2R1Q6VVX0 501 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 GET4Q7L5D6 327 aaPredicted RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 ZBTB8OSQ8IWT0 167 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 FBXL16Q8N461 479 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 LRRC20Q8TCA0 184 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 STOML2Q9UJZ1 356 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 MRPL11Q9Y3B7 192 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 TPRKBQ9Y3C4 175 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 A0A1W2PQ72 361 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PSMD12O00232 456 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 CSPG5O95196 566 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 SERPINA6P08185 405 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ABHD2P08910 425 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 C6orf222P0C671 652 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 BMP3P12645 472 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NELFEP18615 380 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 PEX2P28328 305 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 SSTR1P30872 391 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PEX3P56589 373 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 KCNK10P57789 538 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PLIN5Q00G26 463 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PTK6Q13882 451 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 CARTPTQ16568 116 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 SLFN13Q68D06 897 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 RDM1Q8NG50 284 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ASZ1Q8WWH4 475 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ART4Q93070 314 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 NSMCE3Q96MG7 304 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 TAS2R1Q9NYW7 299 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 SNAP91O60641 907 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 CCNB1P14635 433 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 CNTFP26441 200 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 CCND2P30279 289 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PHC1P78364 1004 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 PPM1LQ5SGD2 360 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ZCCHC9Q8N567 271 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 FNDC8Q8TC99 324 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 FAR2Q96K12 515 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 RNF38Q9H0F5 515 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 PABPC4LP0CB38 370 aaKnown RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 RECQLP46063 649 aaPredicted RBP10.65□□□□□ -0.7
LIN54-202ENST00000442461 AQP4P55087 323 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 GRM4Q14833 912 aa10.65□□□□□ -0.7
LIN54-202ENST00000442461 PPP4R4Q6NUP7 873 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms