RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 PPP1R26Q5T8A7 1209 aaPredicted RBP17.12■□□□□ 0.33
RBM39-215ENST00000442447 CPA6Q8N4T0 437 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 SLC4A11Q8NBS3 891 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 TMEM176AQ96HP8 235 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 ECT2Q9H8V3 914 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 CACNA1IQ9P0X4 2223 aa17.12■□□□□ 0.33
RBM39-215ENST00000442447 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 SCAMP3O14828 347 aaKnown RBP17.11■□□□□ 0.33
RBM39-215ENST00000442447 COCHO43405 550 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 ZDHHC11BP0C7U3 371 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 PGFP49763 221 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 GAS6Q14393 721 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 HECTD3Q5T447 861 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 Q6ZS52 159 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 ASCL5Q7RTU5 278 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
RBM39-215ENST00000442447 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
RBM39-215ENST00000442447 LINC00597Q9H2U6 94 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 FBXO44Q9H4M3 255 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
RBM39-215ENST00000442447 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 PRMT8Q9NR22 394 aaPredicted RBP17.11■□□□□ 0.33
RBM39-215ENST00000442447 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
RBM39-215ENST00000442447 USP34Q70CQ2 3546 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 MYH10P35580 1976 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 PRR23AA6NEV1 266 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 CYP26A1O43174 497 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 GNA14O95837 355 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
RBM39-215ENST00000442447 GJA4P35212 333 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 CCINQ13939 588 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 DGKKQ5KSL6 1271 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
RBM39-215ENST00000442447 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
RBM39-215ENST00000442447 DMDP11532 3685 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 PMM2O15305 246 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 TBXAS1P24557 533 aaPredicted RBP17.09■□□□□ 0.33
RBM39-215ENST00000442447 TUBP50607 506 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
RBM39-215ENST00000442447 AMPD2Q01433 879 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 TMEM196Q5HYL7 178 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 ARHGAP17Q68EM7 881 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 FSTL4Q6MZW2 842 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 ZC3H14Q6PJT7 736 aaKnown RBP17.09■□□□□ 0.33
RBM39-215ENST00000442447 ZFRQ96KR1 1074 aaKnown RBP17.09■□□□□ 0.33
RBM39-215ENST00000442447 NT5C1BQ96P26 610 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 NACA2Q9H009 215 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
RBM39-215ENST00000442447 RWDD2AQ9UIY3 292 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 SCML2Q9UQR0 700 aa17.09■□□□□ 0.33
RBM39-215ENST00000442447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.09■□□□□ 0.33
RBM39-215ENST00000442447 MYO16Q9Y6X6 1858 aa17.08■□□□□ 0.33
RBM39-215ENST00000442447 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
RBM39-215ENST00000442447 P4HA2O15460 535 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 TLR5O60602 858 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 NFATC1O95644 943 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 FGFR1OPO95684 399 aaKnown RBP17.08■□□□□ 0.32
RBM39-215ENST00000442447 CCR3P51677 355 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 KIF11P52732 1056 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 MARSP56192 900 aaKnown RBP17.08■□□□□ 0.32
RBM39-215ENST00000442447 SATB1Q01826 763 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 CETN1Q12798 172 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 KCNH2Q12809 1159 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
RBM39-215ENST00000442447 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■□□□□ 9.8
RBM39-215ENST00000442447 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 UBR7Q8N806 425 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 LMO3Q8TAP4 145 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 FBRSL1Q9HCM7 1045 aaKnown RBP17.08■□□□□ 0.32
RBM39-215ENST00000442447 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
RBM39-215ENST00000442447 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
RBM39-215ENST00000442447 A0A1W2PQH9 124 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 EGFP01133 1207 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
RBM39-215ENST00000442447 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 CD19P15391 556 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 CXCL12P48061 93 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 GALK1P51570 392 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 NR1H3Q13133 447 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 GOLGA7BQ2TAP0 167 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 MAMSTRQ6ZN01 415 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 CLEC17AQ6ZS10 378 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 SPEM1Q8N4L4 309 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 KIAA1958Q8N8K9 716 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 KAT5Q92993 513 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 MED15Q96RN5 788 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 P2RY13Q9BPV8 354 aa17.07■□□□□ 0.32
RBM39-215ENST00000442447 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms