RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NMD3Q96D46 503 aaKnown RBP12.4□□□□□ -0.42
LTBR-203ENST00000441074 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
LTBR-203ENST00000441074 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
LTBR-203ENST00000441074 SSX2IPQ9Y2D8 614 aa12.4□□□□□ -0.42
LTBR-203ENST00000441074 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 PGK2P07205 417 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 FAM163BP0C2L3 166 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 VCLP18206 1134 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 SSTR1P30872 391 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 BPIFB4P59827 614 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 SLC18A2Q05940 514 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 MSLNQ13421 630 aaPredicted RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 SFT2D3Q587I9 215 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 KLC3Q6P597 504 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 RCOR2Q8IZ40 523 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 PPP1R14BQ96C90 147 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 APOPT1Q96IL0 206 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 CLIC5Q9NZA1 410 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ZNFX1Q9P2E3 1918 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■■□□□ 13.7
LTBR-203ENST00000441074 BANF1O75531 89 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ATP5BP06576 529 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 ADRB2P07550 413 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 CYP2C8P10632 490 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 CHN2P52757 468 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 HUNKP57058 714 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 HPCAP84074 193 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 CDK18Q07002 472 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 HSF5Q4G112 596 aaPredicted RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 SH3D19Q5HYK7 790 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 FBXL13Q8NEE6 735 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ZSWIM2Q8NEG5 633 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 FAM111AQ96PZ2 611 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 PCDH9Q9HC56 1237 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
LTBR-203ENST00000441074 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
LTBR-203ENST00000441074 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 TSHRP16473 764 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 STIP1P31948 543 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 SP2Q02086 613 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 GCNT1Q02742 428 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 KDSRQ06136 332 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 DBN1Q16643 649 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 LIN9Q5TKA1 542 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 C7orf26Q96N11 449 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 CATSPER2Q96P56 530 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 WWP1Q9H0M0 922 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 ACAD9Q9H845 621 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 A0A088AWK7 358 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 E5RJQ4 531 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 OR6B1O95007 311 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 ITGAVP06756 1048 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 KRT10P13645 584 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 KRT5P13647 590 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 GJC1P36383 396 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 NSFP46459 744 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 ERFP50548 548 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 APLP1P51693 650 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 SOX10P56693 466 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 FKBP1BP68106 108 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 PDK3Q15120 406 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 PLA2G4FQ68DD2 849 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 LLGL2Q6P1M3 1020 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 LBX2Q6XYB7 198 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 SH2D5Q6ZV89 423 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 ERO1BQ86YB8 467 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
LTBR-203ENST00000441074 NKD2Q969F2 451 aaPredicted RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
LTBR-203ENST00000441074 SLITRK1Q96PX8 696 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms