RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 TXNRD3NBQ6F5E7 133 aa29.3■■■□□ 2.28
CGREF1-207ENST00000440612 AADACL2Q6P093 401 aa29.3■■■□□ 2.28
CGREF1-207ENST00000440612 HFE2Q6ZVN8 426 aa29.3■■■□□ 2.28
CGREF1-207ENST00000440612 ACTRT1Q8TDG2 376 aa29.3■■■□□ 2.28
CGREF1-207ENST00000440612 RNF14Q9UBS8 474 aa29.3■■■□□ 2.28
CGREF1-207ENST00000440612 WDR27A2RRH5 827 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 PSTPIP1O43586 416 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 FYNP06241 537 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 CPB1P15086 417 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 GTF2F1P35269 517 aaKnown RBP eCLIP29.29■■■□□ 2.28
CGREF1-207ENST00000440612 PPM1AP35813 382 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 GRIK1P39086 918 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 TERF1P54274 439 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 SLC25A11Q02978 314 aaKnown RBP29.29■■■□□ 2.28
CGREF1-207ENST00000440612 ACAP1Q15027 740 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 C15orf59Q2T9L4 293 aaPredicted RBP29.29■■■□□ 2.28
CGREF1-207ENST00000440612 LRRC38Q5VT99 294 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 RHOT1Q8IXI2 618 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 SCML4Q8N228 414 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 C8orf48Q96LL4 319 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 CFAP57Q96MR6 1250 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 ASNSD1Q9NWL6 643 aa29.29■■■□□ 2.28
CGREF1-207ENST00000440612 TTC7AQ9ULT0 858 aaPredicted RBP29.29■■■□□ 2.28
CGREF1-207ENST00000440612 COL4A4P53420 1690 aaPredicted RBP29.29■■■□□ 2.28
CGREF1-207ENST00000440612 YJEFN3A6XGL0 299 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 E7ENQ6 273 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 CTIFO43310 598 aaKnown RBP29.28■■■□□ 2.28
CGREF1-207ENST00000440612 CEP104O60308 925 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 ZBED1O96006 694 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 USP17L7P0C7H9 530 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 TFE3P19532 575 aaPredicted RBP29.28■■■□□ 2.28
CGREF1-207ENST00000440612 GLUD2P49448 558 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 GPR15P49685 360 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 ROR1Q01973 937 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 SMARCB1Q12824 385 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 SCAMP5Q8TAC9 235 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 DDX23Q9BUQ8 820 aaKnown RBP29.28■■■□□ 2.28
CGREF1-207ENST00000440612 C2CD2LO14523 706 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 HSF2BPO75031 334 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 FGF18O76093 207 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 GLI1P08151 1106 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 IL1R2P27930 398 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 RWDD2BP57060 319 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 ATP13A4Q4VNC1 1196 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 RNPC3Q96LT9 517 aaKnown RBP29.28■■■□□ 2.28
CGREF1-207ENST00000440612 SLC2A13Q96QE2 648 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 AAASQ9NRG9 546 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 PCDHB12Q9Y5F1 795 aa29.28■■■□□ 2.28
CGREF1-207ENST00000440612 OR1D2P34982 312 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 PTPN9P43378 593 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 SLC5A3P53794 718 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 YWHAZP63104 245 aaKnown RBP29.27■■■□□ 2.28
CGREF1-207ENST00000440612 CKAP4Q07065 602 aaKnown RBP29.27■■■□□ 2.28
CGREF1-207ENST00000440612 DDR2Q16832 855 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 C9orf50Q5SZB4 431 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 KIAA1841Q6NSI8 718 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 CYP4V2Q6ZWL3 525 aaPredicted RBP29.27■■■□□ 2.28
CGREF1-207ENST00000440612 SPPL2BQ8TCT7 592 aa29.27■■■□□ 2.28
CGREF1-207ENST00000440612 CENPIQ92674 756 aaPredicted RBP29.27■■■□□ 2.28
CGREF1-207ENST00000440612 TLL1O43897 1013 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 LILRB3O75022 631 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 DAB1O75553 588 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 SDHAF4Q5VUM1 108 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 OTUD1Q5VV17 481 aaPredicted RBP29.26■■■□□ 2.27
CGREF1-207ENST00000440612 RSRC2Q7L4I2 434 aaKnown RBP29.26■■■□□ 2.27
CGREF1-207ENST00000440612 SCN4BQ8IWT1 228 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 KATNAL2Q8IYT4 538 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 DEFB106AQ8N104 65 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 VPS52Q8N1B4 723 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 MNS1Q8NEH6 495 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 NT5C3BQ969T7 300 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 CALCOCO1Q9P1Z2 691 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 SLC27A5Q9Y2P5 690 aa29.26■■■□□ 2.27
CGREF1-207ENST00000440612 MIPP30301 263 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 SDC4P31431 198 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 PCK1P35558 622 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 MATKP42679 507 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 BNIPLQ7Z465 357 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 SPATA4Q8NEY3 305 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 C2orf15Q8WU43 125 aaKnown RBP29.25■■■□□ 2.27
CGREF1-207ENST00000440612 IRGQQ8WZA9 623 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 PEBP4Q96S96 227 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.25■■■□□ 2.27
CGREF1-207ENST00000440612 CTAGE15A4D2H0 777 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 SOAT2O75908 522 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 CTAGE8P0CG41 777 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 HAPLN1P10915 354 aaPredicted RBP29.25■■■□□ 2.27
CGREF1-207ENST00000440612 ATP11AP98196 1134 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 ITIH3Q06033 890 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 DUSP4Q13115 394 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 NAA30Q147X3 362 aaPredicted RBP29.25■■■□□ 2.27
CGREF1-207ENST00000440612 ANKS1BQ7Z6G8 1248 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 CTAGE6Q86UF2 777 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 CTAGE4Q8IX94 777 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 KLHL23Q8NBE8 558 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 AUTS2Q8WXX7 1259 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 FAM149B1Q96BN6 582 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 IL37Q9NZH6 218 aa29.25■■■□□ 2.27
CGREF1-207ENST00000440612 CCDC85CA6NKD9 419 aa29.24■■■□□ 2.27
CGREF1-207ENST00000440612 TRIM66O15016 1216 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms