RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TDP1Q9NUW8 608 aa19.03■□□□□ 0.64
CPSF4-205ENST00000440514 CHORDC1Q9UHD1 332 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-205ENST00000440514 SMTNL1A8MU46 457 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 XPO1O14980 1071 aaKnown RBP19.02■□□□□ 0.64
CPSF4-205ENST00000440514 KIF11P52732 1056 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 SLC8A3P57103 927 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 RAPGEF1Q13905 1077 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 PKDCCQ504Y2 493 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 KLHDC7AQ5VTJ3 777 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 SMYD5Q6GMV2 418 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 YAF2Q8IY57 180 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 BPIFB1Q8TDL5 484 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 SECISBP2LQ93073 1101 aaKnown RBP19.02■□□□□ 0.64
CPSF4-205ENST00000440514 LRFN3Q9BTN0 628 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 GANQ9H2C0 597 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 BRD9Q9H8M2 597 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 KIF9Q9HAQ2 790 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 CBX8Q9HC52 389 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 ARHGEF3Q9NR81 526 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 OBP2AQ9NY56 170 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 SCML2Q9UQR0 700 aa19.02■□□□□ 0.64
CPSF4-205ENST00000440514 KRBA1A5PL33 1030 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 PRR33A8MZF0 331 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 THAP12O43422 761 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 OLFM2O95897 454 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 ZDHHC11BP0C7U3 371 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 HDCP19113 662 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 GNA15P30679 374 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 FCHO2Q0JRZ9 810 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 USP4Q13107 963 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 ZNF268Q14587 947 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-205ENST00000440514 STILQ15468 1287 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 CNGA2Q16280 664 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 LUZP1Q86V48 1076 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 PBXIP1Q96AQ6 731 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 ZFYVE19Q96K21 471 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 RNF38Q9H0F5 515 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 CCSER2Q9H7U1 834 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 NMUR1Q9HB89 426 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 OSER1Q9NX31 292 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 WNT16Q9UBV4 365 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 SIK3Q9Y2K2 1263 aa19.01■□□□□ 0.63
CPSF4-205ENST00000440514 A0A1W2PQH9 124 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 ZNF263O14978 683 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 EPHB6O15197 1021 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 COCHO43405 550 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 UCHL3P15374 230 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 PLA2G4AP47712 749 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 RGS7P49802 495 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 TKTL1P51854 596 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 SYCP1Q15431 976 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 ZNF77Q15935 545 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 RAB41Q5JT25 222 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 SNX30Q5VWJ9 437 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 DENND1BQ6P3S1 775 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 CCDC186Q7Z3E2 898 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
CPSF4-205ENST00000440514 UBXN6Q9BZV1 441 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 TLR8Q9NR97 1041 aaKnown RBP19■□□□□ 0.63
CPSF4-205ENST00000440514 FAM207AQ9NSI2 230 aaPredicted RBP19■□□□□ 0.63
CPSF4-205ENST00000440514 SMPD4Q9NXE4 827 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 ARHGAP26Q9UNA1 814 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 CPQQ9Y646 472 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 USP3Q9Y6I4 520 aa19■□□□□ 0.63
CPSF4-205ENST00000440514 ARNTLO00327 626 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 FOXN3O00409 490 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-205ENST00000440514 MBL2P11226 248 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-205ENST00000440514 PFKLP17858 780 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 RFX1P22670 979 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 PDE6CP51160 858 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 ZXDBP98169 803 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 PFKPQ01813 784 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 UBXN1Q04323 297 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 ADIGQ0VDE8 80 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 DRAP1Q14919 205 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-205ENST00000440514 HECTD3Q5T447 861 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 SH3RF2Q8TEC5 729 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 DNASE1L2Q92874 299 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 ULBP1Q9BZM6 244 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 MFSD1Q9H3U5 465 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 LRRC4Q9HBW1 653 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 PLCB1Q9NQ66 1216 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 HEBP1Q9NRV9 189 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 TRIOO75962 3097 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 KMT2EQ8IZD2 1858 aa18.99■□□□□ 0.63
CPSF4-205ENST00000440514 LRRC10BA6NIK2 292 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 PIK3R2O00459 728 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 CHADO15335 359 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 TLR5O60602 858 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 GABBR2O75899 941 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 TUBP50607 506 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 SLC7A9P82251 487 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 MTF1Q14872 753 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 MLF2Q15773 248 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-205ENST00000440514 ARHGAP29Q52LW3 1261 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 CWF19L1Q69YN2 538 aaKnown RBP18.98■□□□□ 0.63
CPSF4-205ENST00000440514 PMF1Q6P1K2 205 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 BMP8AQ7Z5Y6 402 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms