RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MIEF2Q96C03 454 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 MIPEPQ99797 713 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 FDXACB1Q9BRP7 624 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 TSSK1BQ9BXA7 367 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CXCL16Q9H2A7 254 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 DENND2DQ9H6A0 471 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 ARL8BQ9NVJ2 186 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 RLFQ13129 1914 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 KAT6AQ92794 2004 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 PHIPQ8WWQ0 1821 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 IRF6O14896 467 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 HMGCRP04035 888 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 CYP3A5P20815 502 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 PAX7P23759 505 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 CPA2P48052 419 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 NDST1P52848 882 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 KRT81Q14533 505 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 CA9Q16790 459 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 Q3C1V9 767 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 MDH1BQ5I0G3 518 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 FAM183BPQ6ZVS7 135 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 MOB2Q70IA6 237 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 SCUBE3Q8IX30 993 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 CCDC110Q8TBZ0 833 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 B3GNT5Q9BYG0 378 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 MIS12Q9H081 205 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 FZD8Q9H461 694 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 FAM49BQ9NUQ9 324 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 PIH1D1Q9NWS0 290 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 MARCOQ9UEW3 520 aaPredicted RBP14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 SUFUQ9UMX1 484 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 FAM237BA0A1B0GVD1 139 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 PEX11AO75192 247 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 TOP3BO95985 862 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 KITP10721 976 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 PROZP22891 400 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC18A1P54219 525 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 IRX4P78413 519 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 MBTD1Q05BQ5 628 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 GRM1Q13255 1194 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 BZW1Q7L1Q6 419 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.151e-12■■■□□ 16.3
HERPUD1-204ENST00000439977 HPDLQ96IR7 371 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 DHRS4Q9BTZ2 278 aa14.13□□□□□ -0.15
HERPUD1-204ENST00000439977 TRIM49D1C9J1S8 452 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 E7ESA3 106 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 CYB561D2O14569 222 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 PRPSAP2O60256 369 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 CILPO75339 1184 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TFE3P19532 575 aaPredicted RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 EDNRBP24530 442 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 YY1P25490 414 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 ATXN1P54253 815 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 SURF1Q15526 300 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TAF11Q15544 211 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 CYP4V2Q6ZWL3 525 aaPredicted RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 RIOX2Q8IUF8 465 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 BCO2Q9BYV7 579 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC5A4Q9NY91 659 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 MAD1L1Q9Y6D9 718 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 C2CD2LO14523 706 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TXNP10599 105 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 ARFIP2P53365 341 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 AMHR2Q16671 573 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 CTC1Q2NKJ3 1217 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 DSTYKQ6XUX3 929 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 APBB1IPQ7Z5R6 666 aaPredicted RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 APOBEC3FQ8IUX4 373 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 ELP3Q9H9T3 547 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 RSAD1Q9HA92 442 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 EFR3BQ9Y2G0 817 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 TEX264Q9Y6I9 313 aa14.12□□□□□ -0.15
HERPUD1-204ENST00000439977 SOCS7O14512 581 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 HCRTO43612 131 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 GPD1P21695 349 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC45A4Q5BKX6 768 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 FNIP1Q8TF40 1166 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 MCRS1Q96EZ8 462 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 CLMNQ96JQ2 1002 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 FAM167AQ96KS9 214 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 TMEM120AQ9BXJ8 343 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 C2orf40Q9H1Z8 148 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 RNPEPL1Q9HAU8 725 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 AKT3Q9Y243 479 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 IGKV6-21A0A0C4DH24 114 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 IQANK1A0A1B0GTG1 560 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 FZD9O00144 591 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 TGFB3P10600 412 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 MYL2P10916 166 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 GRIA1P42261 906 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 ZNF143P52747 638 aaPredicted RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 NOMO1Q15155 1222 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms