RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 NUP85Q9BW27 656 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CARD6Q9BX69 1037 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PLVAPQ9BX97 442 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TLR10Q9BXR5 811 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 THAP2Q9H0W7 228 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 RNF208Q9H0X6 261 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 WNT8AQ9H1J5 351 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SNX25Q9H3E2 840 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SMYD3Q9H7B4 428 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 AGO3Q9H9G7 860 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ACP6Q9NPH0 428 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 LATS2Q9NRM7 1088 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 RGS18Q9NS28 235 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 RNF19AQ9NV58 838 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TAS2R14Q9NYV8 317 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 WDR35Q9P2L0 1181 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CNOT8Q9UFF9 292 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TUBGCP4Q9UGJ1 667 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SALL4Q9UJQ4 1053 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 HES2Q9Y543 173 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SNX9Q9Y5X1 595 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CAPN6Q9Y6Q1 641 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CEP350Q5VT06 3117 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CENPFP49454 3210 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CCDC66A2RUB6 948 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM181BA6NEQ2 426 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DCDC2CA8MYV0 355 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MYO1FO00160 1098 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 O00370 1275 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 EIF1AYO14602 144 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 KCNK3O14649 394 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 PTGESO14684 152 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SPOPO43791 374 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 FTCDO95954 541 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 TFRCP02786 760 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CPB1P15086 417 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DESP17661 470 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 AMPD1P23109 780 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CES1P23141 567 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 WARSP23381 471 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MAN1A1P33908 653 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SOX18P35713 384 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CETN2P41208 172 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 RAP1GAPP47736 663 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 LHX1P48742 406 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GUCY2FP51841 1108 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 NDST1P52848 882 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CDH8P55286 799 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLC8A3P57103 927 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GPLD1P80108 840 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 PLCB3Q01970 1234 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GRIK3Q13003 919 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 TUSC3Q13454 348 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MAMLD1Q13495 774 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF268Q14587 947 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SOWAHAQ2M3V2 549 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GLE1Q53GS7 698 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GLRA4Q5JXX5 417 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 PLEKHA7Q6IQ23 1121 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DENND1BQ6P3S1 775 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DNAJC24Q6P3W2 148 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DCUN1D2Q6PH85 259 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 FBXO46Q6PJ61 603 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DCLRE1AQ6PJP8 1040 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GLB1LQ6UWU2 654 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MMS22LQ6ZRQ5 1243 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CHSY3Q70JA7 882 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MON1BQ7L1V2 547 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 LRRC8DQ7L1W4 858 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 RSRC2Q7L4I2 434 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ANKRD33Q7Z3H0 272 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF572Q7Z3I7 529 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 LIMS2Q7Z4I7 341 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 MTERF4Q7Z6M4 381 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 NT5DC3Q86UY8 548 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 METTL23Q86XA0 190 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ECHDC2Q86YB7 292 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CREG2Q8IUH2 290 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZDHHC17Q8IUH5 632 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 RNF169Q8NCN4 708 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 OR6B3Q8NGW1 331 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 URGCPQ8TCY9 931 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ACTRT1Q8TDG2 376 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 IPO4Q8TEX9 1081 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 TFAP2BQ92481 460 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SEPT8Q92599 483 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 RUBCNQ92622 972 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ELMO3Q96BJ8 720 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 C18orf8Q96DM3 657 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ARHGEF26Q96DR7 871 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 HES6Q96HZ4 224 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 CAPZA3Q96KX2 299 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 DMRTB1Q96MA1 342 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 GAD1Q99259 594 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 NCAPGQ9BPX3 1015 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ELOVL4Q9GZR5 314 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SDCBP2Q9H190 292 aa4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 ELAC1Q9H777 363 aaKnown RBP4.19□□□□□ -1.74
HMGB1P37-201ENST00000439613 SYNCQ9H7C4 482 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms