RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NFATC1O95644 943 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 OAS1P00973 400 aaKnown RBP11.05□□□□□ -0.64
MCF2L-216ENST00000439475 PAEPP09466 180 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 RALAP11233 206 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TARSP26639 723 aaKnown RBP11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ATP5C1P36542 298 aaKnown RBP11.05□□□□□ -0.64
MCF2L-216ENST00000439475 RPS9P46781 194 aaKnown RBP11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TUBP50607 506 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 NHLH1Q02575 133 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 GCNT1Q02742 428 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 GOLGA8FQ08AF8 430 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 GOLGA8DPQ0D2H9 430 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TCF15Q12870 199 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ANGPT1Q15389 498 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ZNF77Q15935 545 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 DGKKQ5KSL6 1271 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TMEM270Q6UE05 265 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 GBP6Q6ZN66 633 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 C1orf210Q8IVY1 113 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ARHGAP18Q8N392 663 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SCAMP5Q8TAC9 235 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 JAKMIP2Q96AA8 810 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SLC22A12Q96S37 553 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 RNF38Q9H0F5 515 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SPATA6Q9NWH7 488 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 CPQQ9Y646 472 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 TICRRQ7Z2Z1 1910 aa11.05□□□□□ -0.64
MCF2L-216ENST00000439475 OLFM2O95897 454 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 TPM2P07951 284 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 ZDHHC11BP0C7U3 371 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 CTHP32929 405 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 KIF11P52732 1056 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 BCAT1P54687 386 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 MFAP3P55082 362 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 USP4Q13107 963 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 SMYD5Q6GMV2 418 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 RRAGAQ7L523 313 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 SYNPOQ8N3V7 929 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 CDK5RAP1Q96SZ6 601 aaKnown RBP11.04□□□□□ -0.64
MCF2L-216ENST00000439475 ARID3AQ99856 593 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 GMIPQ9P107 970 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 DLGAP2Q9P1A6 1054 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 TSPAN16Q9UKR8 245 aa11.04□□□□□ -0.64
MCF2L-216ENST00000439475 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-216ENST00000439475 MUC3AQ02505 3323 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 ZDBF2Q9HCK1 2354 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 E2F8A0AVK6 867 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 GTPBP10A4D1E9 387 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 HHLA1C9JL84 531 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 COCHO43405 550 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 TLR5O60602 858 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 SOX9P48436 509 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 TNK2Q07912 1038 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 BST2Q10589 180 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 GRSF1Q12849 480 aaKnown RBP eCLIP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 CNGA2Q16280 664 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 EXOC3L4Q17RC7 722 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 GOLGA7BQ2TAP0 167 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 DPCR1Q3MIW9 517 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 TRIM68Q6AZZ1 485 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 ZC3H14Q6PJT7 736 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 PIGZQ86VD9 579 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 OTUB2Q96DC9 234 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 SMPD4Q9NXE4 827 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 LSM7Q9UK45 103 aaKnown RBP11.03□□□□□ -0.64
MCF2L-216ENST00000439475 FBXO4Q9UKT5 387 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
MCF2L-216ENST00000439475 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.65
MCF2L-216ENST00000439475 MED7O43513 233 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 ATG13O75143 517 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 SETSIPP0DME0 302 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CHRNB1P11230 501 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 RARGP13631 454 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 ARSAP15289 507 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 DRD1P21728 446 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 GJA4P35212 333 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms