RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ATICP31939 592 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ALDH9A1P49189 494 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 DGKEP52429 567 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 WNT3P56703 355 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 TAP2Q03519 686 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 GALNT1Q10472 559 aaPredicted RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 TXNRD1Q16881 649 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 LY6KQ17RY6 165 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 INO80DQ53TQ3 878 aaPredicted RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 RGS7BPQ6MZT1 257 aaPredicted RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 BEND5Q7L4P6 421 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 YAF2Q8IY57 180 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ZNF527Q8NB42 609 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 DNAJB14Q8TBM8 379 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 MUL1Q969V5 352 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 TMEM41AQ96HV5 264 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ZBTB45Q96K62 511 aaPredicted RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 UROC1Q96N76 676 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ACTRT3Q9BYD9 372 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 AMBRA1Q9C0C7 1298 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 OBP2BQ9NPH6 170 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 XPNPEP3Q9NQH7 507 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ZSCAN32Q9NX65 697 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 DKK4Q9UBT3 224 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ZMYND8Q9ULU4 1186 aaPredicted RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 SCAF8Q9UPN6 1271 aaKnown RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 SHOC2Q9UQ13 582 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 PCDHGB3Q9Y5G1 929 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 LRRC3CA6NJW4 275 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 LINC00473A8K010 186 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 LGALS16A8MUM7 142 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 AGPSO00116 658 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 PIP5K1BO14986 540 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 FFAR2O15552 330 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 RGS10O43665 173 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 SRGAP2O75044 1071 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 EIF3JO75822 258 aaKnown RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 URI1O94763 535 aaPredicted RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 TTLL1O95922 423 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 CSF1RP07333 972 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 RHOP08100 348 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 NR2F6P10588 404 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 CYP2C9P11712 490 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 XRCC6P12956 609 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS41-207ENST00000439468 HGFP14210 728 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 LMO1P25800 156 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 CD6P30203 668 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 NTSR1P30989 418 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 PRKAG1P54619 331 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 LOXL3P58215 753 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 NXPH1P58417 271 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 EIF2B5Q13144 721 aaKnown RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 GRM1Q13255 1194 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 PTPRRQ15256 657 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 RAB30Q15771 203 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 PFKFB4Q16877 469 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 ZNF750Q32MQ0 723 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 MGAT5BQ3V5L5 792 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 CCDC38Q502W7 563 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 TMTC4Q5T4D3 741 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 KIAA0895LQ68EN5 471 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 FBXO38Q6PIJ6 1188 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 KIAA0408Q6ZU52 694 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 AMIGO2Q86SJ2 522 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 SDR16C5Q8N3Y7 309 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 MYCT1Q8N699 235 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 ATG16L2Q8NAA4 619 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 FAM98AQ8NCA5 519 aaKnown RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 NTN5Q8WTR8 489 aaPredicted RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 STYXQ8WUJ0 223 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 MOGAT1Q96PD6 335 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 HAPLN3Q96S86 360 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 PTDSS2Q9BVG9 487 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 STK33Q9BYT3 514 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS41-207ENST00000439468 PCDHAC1Q9H158 963 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 RGL1Q9NZL6 768 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 CDY1Q9Y6F8 540 aa4.17□□□□□ -1.74
VPS41-207ENST00000439468 MORC2Q9Y6X9 1032 aaPredicted RBP4.17□□□□□ -1.74
VPS41-207ENST00000439468 COL11A2P13942 1736 aaPredicted RBP4.16□□□□□ -1.74
VPS41-207ENST00000439468 CLCA1A8K7I4 914 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 SOAT2O75908 522 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 PIAS2O75928 621 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 VNN1O95497 513 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 EBLN1P0CF75 366 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 PECAM1P16284 738 aaPredicted RBP4.16□□□□□ -1.74
VPS41-207ENST00000439468 FHL3Q13643 280 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 DEPDC1Q5TB30 811 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 MANEALQ5VSG8 457 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 ZKSCAN2Q63HK3 967 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 RASAL3Q86YV0 1011 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 ANKRD42Q8N9B4 389 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 FANCBQ8NB91 859 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 CCDC150Q8NCX0 1101 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 FKBP10Q96AY3 582 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 ZC3H10Q96K80 434 aaKnown RBP4.16□□□□□ -1.74
VPS41-207ENST00000439468 NELL2Q99435 816 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 MAGEB5Q9BZ81 275 aa4.16□□□□□ -1.74
VPS41-207ENST00000439468 ALG13Q9NP73 1137 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms