RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 NSMCE4AQ9NXX6 385 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 MTA2O94776 668 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TNNI3P19429 210 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 FAM124AQ86V42 546 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TAS1R2Q8TE23 839 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 ZNF669Q96BR6 464 aaPredicted RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 AP4E1Q9UPM8 1137 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 AAR2Q9Y312 384 aaKnown RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 SLITRK3O94933 977 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 FPGSQ05932 587 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 MTM1Q13496 603 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 JADE3Q92613 823 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 VMP1Q96GC9 406 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 CLPBQ9H078 707 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 MLXIPLQ9NP71 852 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 DYRK1BQ9Y463 629 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 TUBP50607 506 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 POM121L1PQ3SYA9 428 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 APBB2Q92870 758 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 MTBPQ96DY7 904 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 PITPNM3Q9BZ71 974 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 GOLPH3Q9H4A6 298 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 A8MX80 341 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CCL16O15467 120 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 EEF1B2P24534 225 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 CENPAP49450 140 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 MTA1Q13330 715 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ADAM32Q8TC27 787 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CXorf40AQ8TE69 158 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 SMG7Q92540 1137 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK1-201ENST00000439128 HPS4Q9NQG7 708 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CRTAMO95727 393 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 MMP3P08254 477 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK1-201ENST00000439128 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 GRIN3AQ8TCU5 1115 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ABCG4Q9H172 646 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 STX18Q9P2W9 335 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 NDRG2Q9UN36 371 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ESYT3A0FGR9 886 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 HALP42357 657 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 INTS13Q9NVM9 706 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 GOLGA8RI6L899 631 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 CHPFQ8IZ52 775 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 ZNF557Q8N988 423 aaPredicted RBP12.53□□□□□ -0.4
NEK1-201ENST00000439128 FLCNQ8NFG4 579 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 FAM136AQ96C01 138 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 TUBB6Q9BUF5 446 aa12.53□□□□□ -0.4
NEK1-201ENST00000439128 GPR25O00155 361 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 GNRH1P01148 92 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.4
NEK1-201ENST00000439128 NCALDP61601 193 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 POU4F1Q01851 419 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.4
NEK1-201ENST00000439128 CLEC16AQ2KHT3 1053 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 FAXCQ5TGI0 409 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 INTUQ9ULD6 942 aa12.52□□□□□ -0.4
NEK1-201ENST00000439128 VPS26AO75436 327 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 CSH1P0DML2 217 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 CSH2P0DML3 217 aa12.52□□□□□ -0.41
NEK1-201ENST00000439128 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms