RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 MTMR3Q13615 1198 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 HGSNATQ68CP4 663 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 CCDC186Q7Z3E2 898 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 TMEM110Q86TL2 294 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 SCAMP5Q8TAC9 235 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 CPA5Q8WXQ8 436 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 SLITRK6Q9H5Y7 841 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■□□□□ 9.6
CTDSPL-204ENST00000435525 WDR35Q9P2L0 1181 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 USP15Q9Y4E8 981 aaPredicted RBP17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 USP3Q9Y6I4 520 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 NCANO14594 1321 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
CTDSPL-204ENST00000435525 TULP2O00295 520 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ABL1P00519 1130 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 CFHP08603 1231 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 USP17L7P0C7H9 530 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 PFKLP17858 780 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 RPL34P49207 117 aaKnown RBP17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 CENPCQ03188 943 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 GOLGA8FQ08AF8 430 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 GOLGA8DPQ0D2H9 430 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 OR6B2Q6IFH4 312 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ACAD10Q6JQN1 1059 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 OTOP3Q7RTS5 596 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 GPRIN1Q7Z2K8 1008 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 CCDC170Q8IYT3 715 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 CCDC112Q8NEF3 446 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ACSF2Q96CM8 615 aaPredicted RBP17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ULBP1Q9BZM6 244 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 NACA2Q9H009 215 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ADAM22Q9P0K1 906 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ARHGAP20Q9P2F6 1191 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ADAMTS1Q9UHI8 967 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 ZFP37Q9Y6Q3 630 aaPredicted RBP17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 LAMA3Q16787 3333 aa17.38■□□□□ 0.37
CTDSPL-204ENST00000435525 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 FAM92AA1XBS5 289 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 ANKRD62A6NC57 917 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 E5RJQ4 531 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 MBTPS2O43462 519 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 RTN2O75298 545 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 UNGP13051 313 aaPredicted RBP17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 DESP17661 470 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 USP46P62068 366 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 SPA17Q15506 151 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 BTBD8Q5XKL5 378 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 PM20D1Q6GTS8 502 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 WDR59Q6PJI9 974 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 TMC8Q8IU68 726 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 WDTC1Q8N5D0 677 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 CPXM1Q96SM3 734 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 PCDHB18PQ96TA0 734 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 BAG1Q99933 345 aaPredicted RBP17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 SYT11Q9BT88 431 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 GDE1Q9NZC3 331 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 NAGPAQ9UK23 515 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 NR2E1Q9Y466 385 aa17.37■□□□□ 0.37
CTDSPL-204ENST00000435525 LAMA2P24043 3122 aaKnown RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 A0A1W2PRU2 124 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 TMCO5BA8MYB1 307 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 DDX3XO00571 662 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■□ 21
CTDSPL-204ENST00000435525 F11P03951 625 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 GLI1P08151 1106 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 MYBL1P10243 752 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 MMP8P22894 467 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 SCNN1AP37088 669 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 GABRB2P47870 512 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 DAOAP59103 153 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 YWHAGP61981 247 aaKnown RBP eCLIP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 NTHL1P78549 312 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 ZNF268Q14587 947 aaPredicted RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 SLC18A3Q16572 532 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 CCDC122Q5T0U0 273 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 HECTD3Q5T447 861 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 PTCRAQ6ISU1 281 aaPredicted RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 ALKBH5Q6P6C2 394 aaKnown RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 RSRC2Q7L4I2 434 aaKnown RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 GET4Q7L5D6 327 aaPredicted RBP17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 SCUBE3Q8IX30 993 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 TXLNBQ8N3L3 684 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 SLC30A5Q8TAD4 765 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 RNF139Q8WU17 664 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 SUSD6Q92537 303 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 FAM149B1Q96BN6 582 aa17.36■□□□□ 0.37
CTDSPL-204ENST00000435525 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms