RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ITGA8P53708 1063 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 FMO1Q01740 532 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 FCRL6Q6DN72 434 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 CHST15Q7LFX5 561 aaPredicted RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 KCTD20Q7Z5Y7 419 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 YTHDF3Q7Z739 585 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 NEK8Q86SG6 692 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 SFTPA1Q8IWL2 248 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 YAF2Q8IY57 180 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 IPCEF1Q8WWN9 437 aaPredicted RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 TRIM5Q9C035 493 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 BHMT2Q9H2M3 363 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 DHX36Q9H2U1 1008 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 DNMT3BQ9UBC3 853 aaKnown RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 ZNF70Q9UC06 446 aaPredicted RBP4.1□□□□□ -1.75
CLK1-204ENST00000432425 ITGB1BP2Q9UKP3 347 aa4.1□□□□□ -1.75
CLK1-204ENST00000432425 M0R3H8 397 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 RAB27BO00194 218 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 INMTO95050 263 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 CHRM5P08912 532 aaPredicted RBP4.09□□□□□ -1.76
CLK1-204ENST00000432425 PHKG2P15735 406 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 UQCRC1P31930 480 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 ALDH5A1P51649 535 aaPredicted RBP4.09□□□□□ -1.76
CLK1-204ENST00000432425 ZNF626Q68DY1 528 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 CATSPERGQ6ZRH7 1159 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 WDR75Q8IWA0 830 aaKnown RBP4.09□□□□□ -1.76
CLK1-204ENST00000432425 TSR2Q969E8 191 aaKnown RBP4.09□□□□□ -1.76
CLK1-204ENST00000432425 RITA1Q96K30 269 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 MMS19Q96T76 1030 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 SH2D3AQ9BRG2 576 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 SNX15Q9NRS6 342 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 OBP2AQ9NY56 170 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 COL20A1Q9P218 1284 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 MID2Q9UJV3 735 aa4.09□□□□□ -1.76
CLK1-204ENST00000432425 COL3A1P02461 1466 aaPredicted RBP4.09□□□□□ -1.76
CLK1-204ENST00000432425 AQP7P3A6NL99 342 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 GCATO75600 419 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 FGAP02671 866 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 TXNP10599 105 aaKnown RBP4.08□□□□□ -1.76
CLK1-204ENST00000432425 TPH1P17752 444 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 CPT1AP50416 773 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 PGDP52209 483 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 TIRAPP58753 221 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 STK3Q13188 491 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 RNASE12Q5GAN4 147 aaKnown RBP4.08□□□□□ -1.76
CLK1-204ENST00000432425 CEP78Q5JTW2 689 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 SLC18B1Q6NT16 456 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 PTCHD4Q6ZW05 846 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 C14orf80Q86SX3 495 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 SESTD1Q86VW0 696 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 C5orf34Q96MH7 638 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 ZNF778Q96MU6 729 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 FYTTD1Q96QD9 318 aaKnown RBP4.08□□□□□ -1.76
CLK1-204ENST00000432425 C1QTNF7Q9BXJ2 289 aa4.08□□□□□ -1.76
CLK1-204ENST00000432425 CREB1P16220 341 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 RHCEP18577 417 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 RPL17P18621 184 aaKnown RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 CARSP49589 748 aaKnown RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 PSG6Q00889 435 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 TIAL1Q01085 375 aaKnown RBP eCLIP4.07□□□□□ -1.76
CLK1-204ENST00000432425 RHDQ02161 417 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 ZNF750Q32MQ0 723 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 MORN5Q5VZ52 161 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 MIS18BP1Q6P0N0 1132 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 CNGA4Q8IV77 575 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 C8orf58Q8NAV2 365 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 NGDNQ8NEJ9 315 aaKnown RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 TTC8Q8TAM2 541 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 ZNF668Q96K58 619 aaPredicted RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 ZBTB45Q96K62 511 aaPredicted RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 CCDC17Q96LX7 622 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 QTRT1Q9BXR0 403 aaKnown RBP4.07□□□□□ -1.76
CLK1-204ENST00000432425 ZCWPW1Q9H0M4 648 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 CHST8Q9H2A9 424 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 FAM83DQ9H4H8 585 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 TRIM36Q9NQ86 728 aa4.07□□□□□ -1.76
CLK1-204ENST00000432425 BTBD19C9JJ37 291 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 TMEM232C9JQI7 657 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 HGFP14210 728 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 IL1R1P14778 569 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 GATMP50440 423 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 NPY5RQ15761 445 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 FAM187BQ17R55 369 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 SUPT20HL1Q3ZLR7 823 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 C4orf46Q504U0 113 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 BCDIN3DQ7Z5W3 292 aaKnown RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 ADAMTS18Q8TE60 1221 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 RPL36ALQ969Q0 106 aaKnown RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 BTBD1Q9H0C5 482 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 NUP62CLQ9H1M0 184 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 METTL14Q9HCE5 456 aaKnown RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 KLHL42Q9P2K6 505 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 ZNF212Q9UDV6 495 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 RGS17Q9UGC6 210 aaPredicted RBP4.06□□□□□ -1.76
CLK1-204ENST00000432425 PCDHGB6Q9Y5F9 930 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 SNX13Q9Y5W8 968 aa4.06□□□□□ -1.76
CLK1-204ENST00000432425 EXOC5O00471 708 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms