RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 PTPRNQ16849 979 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 WDR72Q3MJ13 1102 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MDH1BQ5I0G3 518 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KIAA1958Q8N8K9 716 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KIAA0895Q8NCT3 520 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GOLGA5Q8TBA6 731 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 P2RY13Q9BPV8 354 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ELOVL4Q9GZR5 314 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SNX25Q9H3E2 840 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DPEP3Q9H4B8 488 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 VRTNQ9H8Y1 702 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SEMA4GQ9NTN9 838 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EHD2Q9NZN4 543 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 RCOR1Q9UKL0 485 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CDV3Q9UKY7 258 aaKnown RBP10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CFAP99D6REC4 459 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 EXOC3O60645 756 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 HSP90AA1P07900 732 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SLFN14P0C7P3 912 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 ANXA13P27216 316 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 AFMP43652 599 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PPP3CCP48454 512 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 IFNAR2P48551 515 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CASP4P49662 377 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TNNC1P63316 161 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SLC7A9P82251 487 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 STK4Q13043 487 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CSRP2Q16527 193 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TDRD10Q5VZ19 366 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 GRAMD1CQ8IYS0 662 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CAMKK1Q8N5S9 505 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 B3GALNT2Q8NCR0 500 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 OR6B3Q8NGW1 331 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PARD3BQ8TEW8 1205 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 GAB3Q8WWW8 586 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CD101Q93033 1021 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 EXOC4Q96A65 974 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 RTKNQ9BST9 563 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 ZNF518BQ9C0D4 1074 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 DMAC2Q9NW81 257 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TRPM5Q9NZQ8 1165 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 KIAA1549LQ6ZVL6 1849 aa10.02□□□□□ -0.81
CDC42-IT1-201ENST00000431803 ACACBO00763 2458 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 A8MXQ7 604 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 LEFTY2O00292 366 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 FOXD2O60548 495 aaPredicted RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 RPP40O75818 363 aaKnown RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 AKAP3O75969 853 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 NFATC1O95644 943 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 RAP1GAPP47736 663 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PXNP49023 591 aaPredicted RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 AP3M2P53677 418 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TAF10Q12962 218 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TRPC3Q13507 836 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 NCOA4Q13772 614 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 GAB4Q2WGN9 574 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PRR23CQ6ZRP0 262 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CEP68Q76N32 757 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SYT13Q7L8C5 426 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CEP57L1Q8IYX8 460 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CYP4X1Q8N118 509 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TTC16Q8NEE8 873 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 RPLP0P6Q8NHW5 317 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 NETO1Q8TDF5 533 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PAGE5Q96GU1 130 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 LOXL4Q96JB6 756 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 B3GNT5Q9BYG0 378 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 RNF38Q9H0F5 515 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 LINC00597Q9H2U6 94 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 KCTD10Q9H3F6 313 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SMYD3Q9H7B4 428 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SLC8A2Q9UPR5 921 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 TPRP12270 2363 aaKnown RBP10.01□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CLDN5O00501 218 aa10□□□□□ -0.81
CDC42-IT1-201ENST00000431803 SLC30A4O14863 429 aa10□□□□□ -0.81
CDC42-IT1-201ENST00000431803 VNN1O95497 513 aa10□□□□□ -0.81
CDC42-IT1-201ENST00000431803 C4BPAP04003 597 aaKnown RBP10□□□□□ -0.81
CDC42-IT1-201ENST00000431803 CYP17A1P05093 508 aa10□□□□□ -0.81
CDC42-IT1-201ENST00000431803 PFKFB1P16118 471 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms