RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 GDAP2Q9NXN4 497 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 NINJ2Q9NZG7 142 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 RRP15Q9Y3B9 282 aaKnown RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 DCDC2CA8MYV0 355 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 E5RJQ4 531 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PRPSAP2O60256 369 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 RECQL4O94761 1208 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 APOC2P02655 101 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PFKMP08237 780 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 CTSHP09668 335 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 STIP1P31948 543 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 SCNN1AP37088 669 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 OTUD4Q01804 1114 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 KCNT1Q5JUK3 1230 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 ERMARDQ5T6L9 678 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PPP1R26Q5T8A7 1209 aaPredicted RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 FAM183BPQ6ZVS7 135 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 ARCQ7LC44 396 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 RFX6Q8HWS3 928 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 OR6B3Q8NGW1 331 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 UHMK1Q8TAS1 419 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 ACTL9Q8TC94 416 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 EPS8L3Q8TE67 593 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 TBCBQ99426 244 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 ADAM7Q9H2U9 754 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PPCSQ9HAB8 311 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PCSK1NQ9UHG2 260 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 SHOC2Q9UQ13 582 aa13.42□□□□□ -0.26
DDX56-204ENST00000431640 PIN4Q9Y237 131 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 KIAA0100Q14667 2235 aaKnown RBP13.42□□□□□ -0.26
DDX56-204ENST00000431640 ATXN2Q99700 1313 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 A0A087WUV0 522 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SMIM23A6NLE4 172 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 A8MXQ7 604 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 CHRNA1P02708 482 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 ACADSBP45954 432 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 NR1H3Q13133 447 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SMTNL2Q2TAL5 461 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SV2CQ496J9 727 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TAF2Q6P1X5 1199 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 CENPUQ71F23 418 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 ANKRD52Q8NB46 1076 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 ACSF2Q96CM8 615 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 XPO6Q96QU8 1125 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 SELENOSQ9BQE4 189 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 LRRC4CQ9HCJ2 640 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TUBGCP4Q9UGJ1 667 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 MCF2LO15068 1137 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 ALOX15BO15296 676 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 CDH16O75309 829 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 CHN1P15882 459 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 EN2P19622 333 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 SDC4P31431 198 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TAF6P49848 677 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SEC24CP53992 1094 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 PTK7Q13308 1070 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 LONRF1Q17RB8 773 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TRIM60Q495X7 471 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 RNASEH2BQ5TBB1 312 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 SLC39A5Q6ZMH5 540 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 APPL2Q8NEU8 664 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 HSPH1Q92598 858 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 C18orf25Q96B23 403 aaPredicted RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 PAWRQ96IZ0 340 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 TNIP3Q96KP6 325 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 TMEM121Q9BTD3 319 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 NXF3Q9H4D5 531 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 INTS9Q9NV88 658 aaKnown RBP13.41□□□□□ -0.26
DDX56-204ENST00000431640 LGALS13Q9UHV8 139 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 ACTL7BQ9Y614 415 aa13.41□□□□□ -0.26
DDX56-204ENST00000431640 HUS1O60921 280 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 IFNB1P01574 187 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 AKAP5P24588 427 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms