RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ANO6Q4KMQ2 910 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 HECTD3Q5T447 861 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 CC2D1AQ6P1N0 951 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 GPRIN1Q7Z2K8 1008 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 TTC30AQ86WT1 665 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 PRSS33Q8NF86 280 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 FLCNQ8NFG4 579 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 CSGALNACT1Q8TDX6 532 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 SLC22A12Q96S37 553 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 BPIFA3Q9BQP9 254 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 TAB2Q9NYJ8 693 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 GMIPQ9P107 970 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 CCL26Q9Y258 94 aa18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 NUP210Q8TEM1 1887 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-203ENST00000431127 DENND4CQ5VZ89 1909 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 OLFM2O95897 454 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 TCF3P15923 654 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 CDK11BP21127 795 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 AVPR2P30518 371 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 MLLT6P55198 1093 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 GJB7Q6PEY0 223 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 PIGZQ86VD9 579 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 KIAA1958Q8N8K9 716 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 TFAP2BQ92481 460 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 TBC1D17Q9HA65 648 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 USP3Q9Y6I4 520 aa18.32■□□□□ 0.52
CTDSP1-203ENST00000431127 SMTNL1A8MU46 457 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 ARNTLO00327 626 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 MAN2B1O00754 1011 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 MED7O43513 233 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 PSEN1P49768 467 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 PTPN5P54829 565 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 PDE4CQ08493 712 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 ARHGAP44Q17R89 818 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 RAB41Q5JT25 222 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 C1orf228Q6PIY5 440 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 DDX42Q86XP3 938 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 ARHGAP18Q8N392 663 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 SH3RF2Q8TEC5 729 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 SHC3Q92529 594 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 MSANTD3Q96H12 275 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 NACA2Q9H009 215 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 RNF38Q9H0F5 515 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 VPS16Q9H269 839 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 LRRC4Q9HBW1 653 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 SIX2Q9NPC8 291 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 HEBP1Q9NRV9 189 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 DNAJC12Q9UKB3 198 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 MRPS17Q9Y2R5 130 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 MYH10P35580 1976 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 OBSL1O75147 1896 aa18.31■□□□□ 0.52
CTDSP1-203ENST00000431127 ZNF638Q14966 1978 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 ZDBF2Q9HCK1 2354 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 LRRC10BA6NIK2 292 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 CYP26A1O43174 497 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 COCHO43405 550 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 MBL2P11226 248 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 ZNF18P17022 549 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 AOC1P19801 751 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 BRD2P25440 801 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 USP8P40818 1118 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 PLA2G4AP47712 749 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 NUBP1P53384 320 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 TCF15Q12870 199 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 USP4Q13107 963 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 MTF1Q14872 753 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 NCAPHQ15003 741 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 PDGFRLQ15198 375 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 ZNF77Q15935 545 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 MEA1Q16626 185 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 PKDCCQ504Y2 493 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 ZNF852Q6ZMS4 543 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 TPRG1Q6ZUI0 275 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 TADA2BQ86TJ2 420 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 UBA3Q8TBC4 463 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 KCTD13Q8WZ19 329 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 NELL2Q99435 816 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 FAM83CQ9BQN1 747 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 C8orf33Q9H7E9 229 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 CYLDQ9NQC7 956 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 GKN1Q9NS71 199 aa18.3■□□□□ 0.52
CTDSP1-203ENST00000431127 KANSL1LA0AUZ9 987 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 SYCE3A1L190 88 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 M0QYV0 167 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 TLR5O60602 858 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 ZNF165P49910 485 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 TKTL1P51854 596 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 KPNA1P52294 538 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 COPB1P53618 953 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 APBA1Q02410 837 aa18.29■□□□□ 0.52
CTDSP1-203ENST00000431127 KCNMA1Q12791 1236 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms