RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 ETFBKMTQ8IXQ9 262 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 PCED1BQ96HM7 432 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 ANKRD36BP1Q96IX9 119 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 FAM84AQ96KN4 292 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 GTPBP2Q9BX10 602 aaKnown RBP23.55■■□□□ 1.36
PTPRA-207ENST00000431048 SMPD4Q9NXE4 827 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 GOLGA8IPA6NC78 632 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 GOLGA8JA6NMD2 632 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 TULP1O00294 542 aaPredicted RBP23.54■■□□□ 1.36
PTPRA-207ENST00000431048 KIAA0391O15091 583 aaKnown RBP23.54■■□□□ 1.36
PTPRA-207ENST00000431048 PDGFRBP09619 1106 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 CYP27A1Q02318 531 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 ZNF33AQ06730 810 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 TAF10Q12962 218 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 LY6G5CQ5SRR4 150 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 MINDY1Q8N5J2 469 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 CBWD1Q9BRT8 395 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 FSCN3Q9NQT6 498 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 STARD13Q9Y3M8 1113 aa23.54■■□□□ 1.36
PTPRA-207ENST00000431048 MYO18AQ92614 2054 aaKnown RBP23.53■■□□□ 1.36
PTPRA-207ENST00000431048 TBC1D3BA6NDS4 549 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 F8VP50 259 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 HOXC11O43248 304 aaPredicted RBP23.53■■□□□ 1.36
PTPRA-207ENST00000431048 GCNT3O95395 438 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 SYPP08247 313 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 GABRG2P18507 467 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 KDSRQ06136 332 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 SURF1Q15526 300 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 NUDT18Q6ZVK8 323 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 SYCP3Q8IZU3 236 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 SLITRK1Q96PX8 696 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 GPSM3Q9Y4H4 160 aa23.53■■□□□ 1.36
PTPRA-207ENST00000431048 PCDH15Q96QU1 1955 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 A0A1W2PQD8 194 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 ZNF217O75362 1048 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 ABL1P00519 1130 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 MBL2P11226 248 aaPredicted RBP23.52■■□□□ 1.36
PTPRA-207ENST00000431048 GJB2P29033 226 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 DUOXA2Q1HG44 320 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 GPD1LQ8N335 351 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 ZNF513Q8N8E2 541 aaPredicted RBP23.52■■□□□ 1.36
PTPRA-207ENST00000431048 OR5B17Q8NGF7 314 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 OVCA2Q8WZ82 227 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 EPSTI1Q96J88 318 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 ZDHHC4Q9NPG8 344 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 TBC1D7Q9P0N9 293 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 DEC1Q9P2X7 70 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 CCDC39Q9UFE4 941 aa23.52■■□□□ 1.36
PTPRA-207ENST00000431048 MYOFQ9NZM1 2061 aa23.52■■□□□ 1.35
PTPRA-207ENST00000431048 SCAMP3O14828 347 aaKnown RBP23.51■■□□□ 1.35
PTPRA-207ENST00000431048 TACC1O75410 805 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 GJB3O75712 270 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 TNNC2P02585 160 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 GNL1P36915 607 aaPredicted RBP23.51■■□□□ 1.35
PTPRA-207ENST00000431048 CASP5P51878 434 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 SF3A1Q15459 793 aaKnown RBP23.51■■□□□ 1.35
PTPRA-207ENST00000431048 TRIP6Q15654 476 aaKnown RBP23.51■■□□□ 1.35
PTPRA-207ENST00000431048 BTBD8Q5XKL5 378 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 USP49Q70CQ1 688 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 SV2BQ7L1I2 683 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 PDZD8Q8NEN9 1154 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 ADAMTS14Q8WXS8 1223 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 ZFRQ96KR1 1074 aaKnown RBP23.51■■□□□ 1.35
PTPRA-207ENST00000431048 PCIF1Q9H4Z3 704 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 CALCOCO1Q9P1Z2 691 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 HCN2Q9UL51 889 aa23.51■■□□□ 1.35
PTPRA-207ENST00000431048 IGHV1OR15-9A0A0B4J2B8 117 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 A0A1W2PQF6 199 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 FRMD3A2A2Y4 597 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 TULP3O75386 442 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 NTSR1P30989 418 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 SCAPQ12770 1279 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 MDH1BQ5I0G3 518 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 SNX30Q5VWJ9 437 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 BRAPQ7Z569 592 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 SLC41A1Q8IVJ1 513 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 DEFB119Q8N690 84 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 ZNF419Q96HQ0 510 aaPredicted RBP23.5■■□□□ 1.35
PTPRA-207ENST00000431048 ELOVL4Q9GZR5 314 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 CD248Q9HCU0 757 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 PTPRJQ12913 1337 aa23.5■■□□□ 1.35
PTPRA-207ENST00000431048 ZNF233A6NK53 670 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 ZBTB24O43167 697 aaPredicted RBP23.49■■□□□ 1.35
PTPRA-207ENST00000431048 RTN3O95197 1032 aaPredicted RBP23.49■■□□□ 1.35
PTPRA-207ENST00000431048 HOXB2P14652 356 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 PTPN1P18031 435 aaKnown RBP23.49■■□□□ 1.35
PTPRA-207ENST00000431048 YWHAQP27348 245 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 HS2ST1Q7LGA3 356 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 NUP93Q8N1F7 819 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 TERB1Q8NA31 727 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 MMS19Q96T76 1030 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 MRPL45Q9BRJ2 306 aaKnown RBP23.49■■□□□ 1.35
PTPRA-207ENST00000431048 SNX25Q9H3E2 840 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 FAM124BQ9H5Z6 455 aaPredicted RBP23.49■■□□□ 1.35
PTPRA-207ENST00000431048 SPHK2Q9NRA0 654 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 TMEM30AQ9NV96 361 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 NME7Q9Y5B8 376 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 ADAMTS20P59510 1910 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 ADAMTS9Q9P2N4 1935 aa23.49■■□□□ 1.35
PTPRA-207ENST00000431048 COCHO43405 550 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms