RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PPCSQ9HAB8 311 aa14.58□□□□□ -0.07
HOXC4-202ENST00000430889 PCDH18Q9HCL0 1135 aa14.58□□□□□ -0.07
HOXC4-202ENST00000430889 UBN1Q9NPG3 1134 aa14.58□□□□□ -0.07
HOXC4-202ENST00000430889 GTF2IRD1Q9UHL9 959 aa14.58□□□□□ -0.07
HOXC4-202ENST00000430889 PIN4Q9Y237 131 aaKnown RBP14.58□□□□□ -0.07
HOXC4-202ENST00000430889 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.58□□□□□ -0.07
HOXC4-202ENST00000430889 TCRBV7S3A2A0A539 114 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 PRPSAP2O60256 369 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
HOXC4-202ENST00000430889 RBP3P10745 1247 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
HOXC4-202ENST00000430889 HDAC4P56524 1084 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 BST2Q10589 180 aaKnown RBP14.58□□□□□ -0.08
HOXC4-202ENST00000430889 TFDP2Q14188 446 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 HIF1AQ16665 826 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 MSS51Q4VC12 460 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 EFHC2Q5JST6 749 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 TRABD2AQ86V40 505 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 NME8Q8N427 588 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 PLD5Q8N7P1 536 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 FAM172AQ8WUF8 416 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 NCAPGQ9BPX3 1015 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 SNRNP25Q9BV90 132 aaKnown RBP14.58□□□□□ -0.08
HOXC4-202ENST00000430889 CALN1Q9BXU9 219 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 HESX1Q9UBX0 185 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 FETUBQ9UGM5 382 aa14.58□□□□□ -0.08
HOXC4-202ENST00000430889 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 MCF2LO15068 1137 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 FSBPO95073 299 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 OAS1P00973 400 aaKnown RBP14.57□□□□□ -0.08
HOXC4-202ENST00000430889 LMO2P25791 158 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 LRPAP1P30533 357 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 PNPLA4P41247 253 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 BCAT1P54687 386 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
HOXC4-202ENST00000430889 BEX3Q00994 111 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 KCNJ11Q14654 390 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 CA9Q16790 459 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 FNBP1LQ5T0N5 605 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 GKAP1Q5VSY0 366 aaPredicted RBP14.57□□□□□ -0.08
HOXC4-202ENST00000430889 SCUBE3Q8IX30 993 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 CACNA2D3Q8IZS8 1091 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 FAM71DQ8N9W8 422 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 OR6B3Q8NGW1 331 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 SPATA18Q8TC71 538 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 CKAP2Q8WWK9 683 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 RSAD2Q8WXG1 361 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 APBA2Q99767 749 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 DHRS4Q9BTZ2 278 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 B3GNT5Q9BYG0 378 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 TRIM6Q9C030 488 aaPredicted RBP14.57□□□□□ -0.08
HOXC4-202ENST00000430889 RASSF4Q9H2L5 321 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 RRAGCQ9HB90 399 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 IPPQ9Y573 584 aa14.57□□□□□ -0.08
HOXC4-202ENST00000430889 EXOC1LA0A1B0GW35 172 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 MANSC4A6NHS7 340 aaPredicted RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 A8MXQ7 604 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 XPOTO43592 962 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 BANF1O75531 89 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 MYL3P08590 195 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 CCDC130P13994 396 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 BRAFP15056 766 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 TSHRP16473 764 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 TFE3P19532 575 aaPredicted RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 TGM2P21980 687 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 WARSP23381 471 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 SDC4P31431 198 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 SLC18A1P54219 525 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ARL4CP56559 192 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ATP11AP98196 1134 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ROR1Q01973 937 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 PDIA2Q13087 525 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 IFT88Q13099 833 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 NR1H3Q13133 447 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 CDO1Q16878 200 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ANKRD20A8PQ5CZ79 823 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ZC3H12AQ5D1E8 599 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ZNF618Q5T7W0 954 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 CPLX4Q7Z7G2 160 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 OSTM1Q86WC4 334 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ZBED8Q8IZ13 594 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 PCDH19Q8TAB3 1148 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 CLEC4CQ8WTT0 213 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ZNF670Q9BS34 389 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 KATNAL1Q9BW62 490 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 APOL6Q9BWW8 343 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 KLK14Q9P0G3 267 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 SLC24A2Q9UI40 661 aa14.56□□□□□ -0.08
HOXC4-202ENST00000430889 ZNF638Q14966 1978 aaKnown RBP14.56□□□□□ -0.08
HOXC4-202ENST00000430889 C17orf102A2RUQ5 167 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 PTGESO14684 152 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TKTP29401 623 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms