RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TRPC7Q9HCX4 862 aa26.48■■□□□ 1.83
CPNE1-212ENST00000430570 CBFA2T2O43439 604 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 ZDHHC11BP0C7U3 371 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 FCARP24071 287 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 KRT9P35527 623 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 PPP3CCP48454 512 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 ARID5AQ03989 594 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 HTR4Q13639 388 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 MEA1Q16626 185 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 TANGO2Q6ICL3 276 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 ARID3BQ8IVW6 561 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-212ENST00000430570 SLC20A1Q8WUM9 679 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 SMARCD2Q92925 531 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 CYP2S1Q96SQ9 504 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 COL25A1Q9BXS0 654 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-212ENST00000430570 SMG9Q9H0W8 520 aaKnown RBP26.47■■□□□ 1.83
CPNE1-212ENST00000430570 NUMBLQ9Y6R0 609 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 VCANP13611 3396 aa26.47■■□□□ 1.83
CPNE1-212ENST00000430570 LCP1P13796 627 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 DDX6P26196 483 aaKnown RBP eCLIP26.46■■□□□ 1.839e-13■■■■□ 25.3
CPNE1-212ENST00000430570 PDE6CP51160 858 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 ADIGQ0VDE8 80 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 FIGNQ5HY92 759 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 CCDC186Q7Z3E2 898 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 SCD5Q86SK9 330 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 PDZD8Q8NEN9 1154 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 HSFY1Q96LI6 401 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 ANP32EQ9BTT0 268 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 NUP58Q9BVL2 599 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 PLA2G2FQ9BZM2 168 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 LHX5Q9H2C1 402 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 NMUR1Q9HB89 426 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 OSER1Q9NX31 292 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 NOCTQ9UK39 431 aaKnown RBP26.46■■□□□ 1.83
CPNE1-212ENST00000430570 MYO16Q9Y6X6 1858 aa26.46■■□□□ 1.83
CPNE1-212ENST00000430570 NCANO14594 1321 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 LRRC53A6NM62 1247 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 TPM3P06753 285 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 MMEP08473 750 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 CHRNB2P17787 502 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 VIPR2P41587 438 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 RPL34P49207 117 aaKnown RBP26.45■■□□□ 1.83
CPNE1-212ENST00000430570 SNX30Q5VWJ9 437 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 SARM1Q6SZW1 724 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 CMTM8Q8IZV2 173 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 ARL14EPQ8N8R7 260 aaPredicted RBP26.45■■□□□ 1.83
CPNE1-212ENST00000430570 RSPRY1Q96DX4 576 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 KXD1Q9BQD3 176 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 EDEM3Q9BZQ6 932 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 RNF38Q9H0F5 515 aa26.45■■□□□ 1.83
CPNE1-212ENST00000430570 A0A1W2PQH9 124 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 E4F1Q66K89 784 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-212ENST00000430570 PM20D1Q6GTS8 502 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 BHLHA9Q7RTU4 235 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 IRF2BP2Q7Z5L9 587 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 C1orf131Q8NDD1 294 aaKnown RBP26.44■■□□□ 1.82
CPNE1-212ENST00000430570 CPLX3Q8WVH0 158 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 KHSRPQ92945 711 aaKnown RBP eCLIP26.44■■□□□ 1.828e-8■■■□□ 15.7
CPNE1-212ENST00000430570 SLC4A5Q9BY07 1137 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 TRPV4Q9HBA0 871 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 ZFP14Q9HCL3 533 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 TLR8Q9NR97 1041 aaKnown RBP26.44■■□□□ 1.82
CPNE1-212ENST00000430570 ST7Q9NRC1 585 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 IGSF9Q9P2J2 1179 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 TJP2Q9UDY2 1190 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 MYO6Q9UM54 1294 aa26.44■■□□□ 1.82
CPNE1-212ENST00000430570 SOBPA7XYQ1 873 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 PRAMEF12O95522 483 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 ZBED1O96006 694 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 OAS1P00973 400 aaKnown RBP26.43■■□□□ 1.82
CPNE1-212ENST00000430570 WEE1P30291 646 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 MTSS1LQ765P7 747 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 STK32AQ8WU08 396 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 LRRC3BQ96PB8 259 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 PDCL3Q9H2J4 239 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 SMOC2Q9H3U7 446 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 CCSER2Q9H7U1 834 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 MUTYHQ9UIF7 546 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 ITIH6Q6UXX5 1313 aa26.43■■□□□ 1.82
CPNE1-212ENST00000430570 TRAV19A0A0A6YYK7 116 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 FAM170AA1A519 330 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 FERP16591 822 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 HDCP19113 662 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 FMO1Q01740 532 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 CDR2Q01850 454 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 PDCLQ13371 301 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 SIX6OS1Q8N1H7 587 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 SLC44A3Q8N4M1 653 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 CLEC4CQ8WTT0 213 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 USP13Q92995 863 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-212ENST00000430570 ELSPBP1Q96BH3 223 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 TRIM5Q9C035 493 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 ZMYM5Q9UJ78 669 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 CCL26Q9Y258 94 aa26.42■■□□□ 1.82
CPNE1-212ENST00000430570 NUP210Q8TEM1 1887 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-212ENST00000430570 A0A1W2PQJ5 194 aa26.41■■□□□ 1.82
CPNE1-212ENST00000430570 ECI2O75521 394 aa26.41■■□□□ 1.82
CPNE1-212ENST00000430570 OLFM2O95897 454 aa26.41■■□□□ 1.82
CPNE1-212ENST00000430570 GYPCP04921 128 aa26.41■■□□□ 1.82
CPNE1-212ENST00000430570 CDH5P33151 784 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms