RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RXFP3Q9NSD7 469 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 ASPMQ8IZT6 3477 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 TP53BP1Q12888 1972 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CKAP5Q14008 2032 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 K7EQS6 105 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CYP26A1O43174 497 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 GDF9O60383 454 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 GREM1O60565 184 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 AP1G2O75843 785 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CLSTN1O94985 981 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 ZNF202O95125 648 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 ABL1P00519 1130 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 FAM163BP0C2L3 166 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 HOXA6P31267 233 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 SLC6A11P48066 632 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 VAMP7P51809 220 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 PMS1P54277 932 aaKnown RBP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 NRLP54845 237 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 SEC13P55735 322 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 GRSF1Q12849 480 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 NFIL3Q16649 462 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 KBTBD6Q86V97 674 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 NUP93Q8N1F7 819 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 GUF1Q8N442 669 aaKnown RBP12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CD101Q93033 1021 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 FBXO32Q969P5 355 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 SMARCD1Q96GM5 515 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 SMOC1Q9H4F8 434 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 CSNK1G1Q9HCP0 422 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 AKAP13Q12802 2813 aa12.5□□□□□ -0.41
HDAC4-202ENST00000430200 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 MAP1BP46821 2468 aaKnown RBP12.49□□□□□ -0.41
HDAC4-202ENST00000430200 DCLK1O15075 740 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 TRIM24O15164 1050 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 MYL1P05976 194 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-202ENST00000430200 CD58P19256 250 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 DRD1P21728 446 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 YWHAQP27348 245 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 ADORA2BP29275 332 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 AP3M2P53677 418 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 KDSRQ06136 332 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 DHCR24Q15392 516 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-202ENST00000430200 BBS7Q8IWZ6 715 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 FAM186BQ8IYM0 893 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 ENGASEQ8NFI3 743 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 MED10Q9BTT4 135 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 NMUR1Q9HB89 426 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 CHORDC1Q9UHD1 332 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-202ENST00000430200 GMEB2Q9UKD1 530 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 CEP295Q9C0D2 2601 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 PI4KAP42356 2102 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
HDAC4-202ENST00000430200 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 MDM4O15151 490 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 MAPK13O15264 365 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 CALUO43852 315 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-202ENST00000430200 CILPO75339 1184 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 NFATC1O95644 943 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 TBX18O95935 607 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 RETP07949 1114 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 IRF1P10914 325 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 MCCD1P59942 119 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-202ENST00000430200 DMC1Q14565 340 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SNX30Q5VWJ9 437 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 DGLUCYQ7Z3D6 616 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 CRYBG2Q8N1P7 616 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SLITRK1Q96PX8 696 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 NIF3L1Q9GZT8 377 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-202ENST00000430200 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
HDAC4-202ENST00000430200 IKBKBO14920 756 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 RPP40O75818 363 aaKnown RBP12.47□□□□□ -0.41
HDAC4-202ENST00000430200 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-202ENST00000430200 PFKLP17858 780 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 BCKDHBP21953 392 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 PRCPP42785 496 aa12.47□□□□□ -0.41
HDAC4-202ENST00000430200 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
HDAC4-202ENST00000430200 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC4-202ENST00000430200 CBWD6Q4V339 395 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms