RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
USP40-205ENST00000430158 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 LHX5Q9H2C1 402 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP40-205ENST00000430158 AIPL1Q9NZN9 384 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 CAPN11Q9UMQ6 739 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 SCML2Q9UQR0 700 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 FAM50BQ9Y247 325 aa13.11□□□□□ -0.31
USP40-205ENST00000430158 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
USP40-205ENST00000430158 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 ANHXE9PGG2 379 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 M0QYV0 167 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 FGF19O95750 216 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 LAMP2P13473 410 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 YWHAQP27348 245 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 WEE1P30291 646 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 CDC25CP30307 473 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 FMO1Q01740 532 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 TAF10Q12962 218 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
USP40-205ENST00000430158 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 TEAD2Q15562 447 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 SCD5Q86SK9 330 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 TMEM110Q86TL2 294 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 SCML4Q8N228 414 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 ING5Q8WYH8 240 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 OVCA2Q8WZ82 227 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 HSFY1Q96LI6 401 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 SPAG5Q96R06 1193 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 SLC46A2Q9BY10 475 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 GDE1Q9NZC3 331 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 UXTQ9UBK9 157 aaPredicted RBP13.1□□□□□ -0.31
USP40-205ENST00000430158 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
USP40-205ENST00000430158 MAGED2Q9UNF1 606 aaPredicted RBP13.1□□□□□ -0.31
USP40-205ENST00000430158 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 MED7O43513 233 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 OLFM2O95897 454 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 FCARP24071 287 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 PRKCIP41743 596 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 ZNF75DP51815 510 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 CYP4F8P98187 520 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 CDR2Q01850 454 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 HGSNATQ68CP4 663 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 TMEM92Q6UXU6 159 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 GET4Q7L5D6 327 aaPredicted RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 NDRG1Q92597 394 aaKnown RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 IQCDQ96DY2 449 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 NECAB3Q96P71 396 aaPredicted RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 SLC22A12Q96S37 553 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 PCDHB18PQ96TA0 734 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 GMIPQ9P107 970 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
USP40-205ENST00000430158 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
USP40-205ENST00000430158 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 CYP1A1P04798 512 aaPredicted RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 MMEP08473 750 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 PPP3CCP48454 512 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 RGS7P49802 495 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 TKTL1P51854 596 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 ZBED6P86452 979 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 HTR4Q13639 388 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 TAF12Q16514 161 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 FBXO32Q969P5 355 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 MRFAP1L1Q96HT8 127 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 ASB16Q96NS5 453 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 FBXO44Q9H4M3 255 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 EHD2Q9NZN4 543 aa13.08□□□□□ -0.32
USP40-205ENST00000430158 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
USP40-205ENST00000430158 MUC3AQ02505 3323 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms