RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CHRM1P11229 460 aaPredicted RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 GNL1P36915 607 aaPredicted RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 KIR2DL1P43626 348 aaPredicted RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 MAP7D1Q3KQU3 841 aa19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 OR6B3Q8NGW1 331 aa19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 ZCCHC14Q8WYQ9 949 aaKnown RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 MRPL45Q9BRJ2 306 aaKnown RBP19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 FREM2Q5SZK8 3169 aa19.5■□□□□ 0.71
UPK3BP1-201ENST00000428678 ITPR1Q14643 2758 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 ADAMTS9Q9P2N4 1935 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 SRRM3A6NNA2 597 aaPredicted RBP19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 ADAM23O75077 832 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 ITPKAP23677 461 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 DPP6P42658 865 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 TNFRSF4P43489 277 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 CACNA2D1P54289 1103 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 COL9A2Q14055 689 aaPredicted RBP19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 LY6G5CQ5SRR4 150 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 TRAPPC11Q7Z392 1133 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 WDR49Q8IV35 697 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 CCDC65Q8IXS2 484 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 TBC1D14Q9P2M4 693 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 CEP192Q8TEP8 1941 aa19.49■□□□□ 0.71
UPK3BP1-201ENST00000428678 SPAARA0A1B0GVQ0 90 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 TBC1D3BA6NDS4 549 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 PTPN1P18031 435 aaKnown RBP19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 ATXN3P54252 364 aaPredicted RBP19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 SIM1P81133 766 aaPredicted RBP19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 SPDYCQ5MJ68 293 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 SLC23A3Q6PIS1 610 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 STXBP4Q6ZWJ1 553 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 GLIS3Q8NEA6 775 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 GTPBP2Q9BX10 602 aaKnown RBP19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 ZNF518BQ9C0D4 1074 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 ELOVL4Q9GZR5 314 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 DPEP3Q9H4B8 488 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 FSCN3Q9NQT6 498 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 TMEM30AQ9NV96 361 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 HSPBP1Q9NZL4 362 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 PILRBQ9UKJ0 227 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 NEUROG3Q9Y4Z2 214 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 NME7Q9Y5B8 376 aa19.48■□□□□ 0.71
UPK3BP1-201ENST00000428678 A0A0A0MRY4 1105 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 E2F8A0AVK6 867 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 CLDN5O00501 218 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 DLATP10515 647 aaKnown RBP19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 YWHAQP27348 245 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 TNNC1P63316 161 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 GAD2Q05329 585 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 BTBD8Q5XKL5 378 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 HDDC3Q8N4P3 179 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 DEFB119Q8N690 84 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 NAT16Q8N8M0 369 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 FBXO32Q969P5 355 aa19.47■□□□□ 0.71
UPK3BP1-201ENST00000428678 A0A087X0B3 334 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 AP5Z1O43299 807 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 TACC1O75410 805 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 CST3P01034 146 aaPredicted RBP19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 HOXB3P14651 431 aaPredicted RBP19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 TNNI1P19237 187 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 HOXD12P35452 270 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 RPL6Q02878 288 aaKnown RBP19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 SEMA3BQ13214 749 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 FAM173BQ6P4H8 233 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 TRMT11Q7Z4G4 463 aaKnown RBP19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 PIP4P1Q86T03 277 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 NUP93Q8N1F7 819 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 PHTF2Q8N3S3 785 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 PDILTQ8N807 584 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 ZNF513Q8N8E2 541 aaPredicted RBP19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 RDH13Q8NBN7 331 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 PDZD8Q8NEN9 1154 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 CEP76Q8TAP6 659 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 HPS3Q969F9 1004 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 OTUB2Q96DC9 234 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 KIAA1586Q9HCI6 787 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 KLK13Q9UKR3 277 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 SLC6A14Q9UN76 642 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 SH3BP1Q9Y3L3 701 aa19.46■□□□□ 0.71
UPK3BP1-201ENST00000428678 A8MXQ7 604 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 COCHO43405 550 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 RTN3O95197 1032 aaPredicted RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 GFPT1Q06210 699 aaPredicted RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 SNRNP35Q16560 246 aaKnown RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 DUOXA1Q1HG43 343 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 WDR72Q3MJ13 1102 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 PREPLQ4J6C6 727 aaPredicted RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 C10orf76Q5T2E6 689 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 PEAR1Q5VY43 1037 aaPredicted RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 SLC36A4Q6YBV0 504 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 ETFBKMTQ8IXQ9 262 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 B3GALNT2Q8NCR0 500 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 ZFRQ96KR1 1074 aaKnown RBP19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 CGRRF1Q99675 332 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 B3GNT5Q9BYG0 378 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 DEC1Q9P2X7 70 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 MSRB2Q9Y3D2 182 aa19.45■□□□□ 0.7
UPK3BP1-201ENST00000428678 UPK3BL1B0FP48 263 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 UPK3BL2E5RIL1 263 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms