RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TTC39CQ8N584 583 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 CHFRQ96EP1 664 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 HEXIM2Q96MH2 286 aaKnown RBP19.5■□□□□ 0.71
GPC1-205ENST00000427506 HNRNPABQ99729 332 aaKnown RBP19.5■□□□□ 0.71
GPC1-205ENST00000427506 NACA2Q9H009 215 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 IL37Q9NZH6 218 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 GMIPQ9P107 970 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 CFAP97Q9P2B7 532 aa19.5■□□□□ 0.71
GPC1-205ENST00000427506 ANAPC1Q9H1A4 1944 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 BIN1O00499 593 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 COCHO43405 550 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CD44P16070 742 aaKnown RBP19.49■□□□□ 0.71
GPC1-205ENST00000427506 CCDC40Q4G0X9 1142 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CLEC20AQ6ZU45 233 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 FILIP1Q7Z7B0 1213 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 WHAMMQ8TF30 809 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 NELL1Q92832 810 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 CD101Q93033 1021 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 FAXDC2Q96IV6 333 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 METTL14Q9HCE5 456 aaKnown RBP19.49■□□□□ 0.71
GPC1-205ENST00000427506 CISHQ9NSE2 258 aa19.49■□□□□ 0.71
GPC1-205ENST00000427506 SLC9A3R1O14745 358 aaPredicted RBP19.48■□□□□ 0.71
GPC1-205ENST00000427506 SCAMP3O14828 347 aaKnown RBP19.48■□□□□ 0.71
GPC1-205ENST00000427506 EGFP01133 1207 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 TDGF1P13385 188 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 DRD1P21728 446 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 SNX30Q5VWJ9 437 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 TATDN2Q93075 761 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 CEP63Q96MT8 703 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 CCSER2Q9H7U1 834 aa19.48■□□□□ 0.71
GPC1-205ENST00000427506 FBRSL1Q9HCM7 1045 aaKnown RBP19.48■□□□□ 0.71
GPC1-205ENST00000427506 TLR8Q9NR97 1041 aaKnown RBP19.48■□□□□ 0.71
GPC1-205ENST00000427506 FAM92AA1XBS5 289 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 LILRB5O75023 590 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 ATG13O75143 517 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 ACO1P21399 889 aaKnown RBP19.47■□□□□ 0.71
GPC1-205ENST00000427506 TUBP50607 506 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 PPP1R26Q5T8A7 1209 aaPredicted RBP19.47■□□□□ 0.71
GPC1-205ENST00000427506 NAIF1Q69YI7 327 aaPredicted RBP19.47■□□□□ 0.71
GPC1-205ENST00000427506 HEATR6Q6AI08 1181 aaKnown RBP19.47■□□□□ 0.71
GPC1-205ENST00000427506 KIAA1958Q8N8K9 716 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 SUMF1Q8NBK3 374 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 NELFBQ8WX92 580 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 RUBCNQ92622 972 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 TMEM176AQ96HP8 235 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 ARID3AQ99856 593 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 CHMP5Q9NZZ3 219 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 CTNND2Q9UQB3 1225 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 SH3BP1Q9Y3L3 701 aa19.47■□□□□ 0.71
GPC1-205ENST00000427506 BICDL2A1A5D9 508 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 CHURC1-FNTBB4DL54 471 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 RNF40O75150 1001 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 ZDHHC11BP0C7U3 371 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 FNTBP49356 437 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 MORC3Q14149 939 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 FBXO43Q4G163 708 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 GPRIN1Q7Z2K8 1008 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 SLC35C1Q96A29 364 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 DUSP16Q9BY84 665 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 C2orf42Q9NWW7 574 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 TBC1D14Q9P2M4 693 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 NCDNQ9UBB6 729 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 RAB23Q9ULC3 237 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 COQ4Q9Y3A0 265 aa19.46■□□□□ 0.71
GPC1-205ENST00000427506 HELZP42694 1942 aaKnown RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 USP34Q70CQ2 3546 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 E2F8A0AVK6 867 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 PPP1R3GB7ZBB8 358 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 HHLA1C9JL84 531 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 K7ESF4 209 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 TLR5O60602 858 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 PAPSS2O95340 614 aaPredicted RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 IRF1P10914 325 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 BMP6P22004 513 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 RAD23BP54727 409 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 UBE2HP62256 183 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 YWHAEP62258 255 aaKnown RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 LRMPQ12912 555 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 CUL2Q13617 745 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 TTI2Q6NXR4 508 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 PKN3Q6P5Z2 889 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 ADGRG2Q8IZP9 1017 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 SLC4A11Q8NBS3 891 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 DUSP9Q99956 384 aaKnown RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 EPC1Q9H2F5 836 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 FAM124BQ9H5Z6 455 aaPredicted RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 PNPLA8Q9NP80 782 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 SMG5Q9UPR3 1016 aaKnown RBP19.45■□□□□ 0.7
GPC1-205ENST00000427506 SLC8A2Q9UPR5 921 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 SCML2Q9UQR0 700 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 MYO15AQ9UKN7 3530 aa19.45■□□□□ 0.7
GPC1-205ENST00000427506 CYP26A1O43174 497 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 CYP17A1P05093 508 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 FMO5P49326 533 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 STX17P56962 302 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 SLC8A3P57103 927 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms