RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 GMIPQ9P107 970 aa18.19■□□□□ 0.5
LMCD1-204ENST00000426878 PCDHB4Q9Y5E5 795 aa18.19■□□□□ 0.5
LMCD1-204ENST00000426878 PIAS3Q9Y6X2 628 aa18.19■□□□□ 0.5
LMCD1-204ENST00000426878 CACNA1HO95180 2353 aa18.19■□□□□ 0.5
LMCD1-204ENST00000426878 HELZP42694 1942 aaKnown RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 RNF225M0QZC1 329 aaPredicted RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 O00370 1275 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 GALR2O43603 387 aaPredicted RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 ABL1P00519 1130 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 ZXDBP98169 803 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 MTF1Q14872 753 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 PDGFRLQ15198 375 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 EXOC3L4Q17RC7 722 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 CC2D1AQ6P1N0 951 aaPredicted RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 TRIM65Q6PJ69 517 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 TTC30AQ86WT1 665 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 CCDC105Q8IYK2 499 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 ZNF687Q8N1G0 1237 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 TUBGCP2Q9BSJ2 902 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 CRACR2AQ9BSW2 395 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 NDST4Q9H3R1 872 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 TLR8Q9NR97 1041 aaKnown RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 SAMSN1Q9NSI8 373 aaKnown RBP18.18■□□□□ 0.5
LMCD1-204ENST00000426878 TSPAN16Q9UKR8 245 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
LMCD1-204ENST00000426878 FAM170BA6NMN3 283 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CD19P15391 556 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CD72P21854 359 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 EEF1GP26641 437 aaKnown RBP18.17■□□□□ 0.5
LMCD1-204ENST00000426878 PON1P27169 355 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 MAGEA9P43362 315 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 BCAT1P54687 386 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 STILQ15468 1287 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CNGA2Q16280 664 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 ITPRIPL2Q3MIP1 535 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 RAB41Q5JT25 222 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 MIIPQ5JXC2 388 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 LCLAT1Q6UWP7 414 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CCDC186Q7Z3E2 898 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 RALGPS2Q86X27 583 aaPredicted RBP18.17■□□□□ 0.5
LMCD1-204ENST00000426878 ZNF276Q8N554 614 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 DTWD2Q8NBA8 298 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 PRSS33Q8NF86 280 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 OSCP1Q8WVF1 389 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CLDN23Q96B33 292 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 UBE2TQ9NPD8 197 aaPredicted RBP18.17■□□□□ 0.5
LMCD1-204ENST00000426878 CYLDQ9NQC7 956 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 HPS4Q9NQG7 708 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 TMEM63CQ9P1W3 806 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 HESX1Q9UBX0 185 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 COL4A3Q01955 1670 aa18.17■□□□□ 0.5
LMCD1-204ENST00000426878 MIA3Q5JRA6 1907 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 KCNJ18B7U540 433 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 XPO1O14980 1071 aaKnown RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 NCAM2O15394 837 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 COCHO43405 550 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 SLC9A1P19634 815 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 TARSP26639 723 aaKnown RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 PSEN1P49768 467 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 KPNA1P52294 538 aaPredicted RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 PTPN5P54829 565 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 TNK2Q07912 1038 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 BST2Q10589 180 aaKnown RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 TCF15Q12870 199 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 RUNX3Q13761 415 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 KCNJ12Q14500 433 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 UBXN2BQ14CS0 331 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 STX1AQ16623 288 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 GOLGA7BQ2TAP0 167 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 TCP11X2Q5H9J9 407 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 PIGZQ86VD9 579 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 DDX42Q86XP3 938 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 RBBP8NLQ8NC74 664 aaPredicted RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 TFAP2BQ92481 460 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 FAM3CQ92520 227 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 MTF2Q9Y483 593 aaPredicted RBP18.16■□□□□ 0.5
LMCD1-204ENST00000426878 CPQQ9Y646 472 aa18.16■□□□□ 0.5
LMCD1-204ENST00000426878 SPECC1L-ADORA2AF8WAN1 911 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 LEFTY2O00292 366 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 CYP26A1O43174 497 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 TLR5O60602 858 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 DCNP07585 359 aaKnown RBP18.15■□□□□ 0.5
LMCD1-204ENST00000426878 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 CTHP32929 405 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 RPS9P46781 194 aaKnown RBP18.15■□□□□ 0.5
LMCD1-204ENST00000426878 PGFP49763 221 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 MFAP3P55082 362 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 PDE4CQ08493 712 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 FZD5Q13467 585 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 CDKAL1Q5VV42 579 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 KLHDC10Q6PID8 442 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 IRF2BPLQ9H1B7 796 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 CCSER2Q9H7U1 834 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 DUS2Q9NX74 493 aaKnown RBP18.15■□□□□ 0.5
LMCD1-204ENST00000426878 CLIC5Q9NZA1 410 aa18.15■□□□□ 0.5
LMCD1-204ENST00000426878 MBL2P11226 248 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms