RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HNRNPABQ99729 332 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 LSM14BQ9BX40 385 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 GPR88Q9GZN0 384 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 GANQ9H2C0 597 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ABCB6Q9NP58 842 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TIMMDC1Q9NPL8 285 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 PLCB1Q9NQ66 1216 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TMEM30AQ9NV96 361 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ABI2Q9NYB9 513 aaPredicted RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 THEGQ9P2T0 379 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 DNMT3BQ9UBC3 853 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 USP15Q9Y4E8 981 aaPredicted RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 YIPF1Q9Y548 306 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 PCDHB4Q9Y5E5 795 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 EPHB6O15197 1021 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 AP5Z1O43299 807 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 BEST1O76090 585 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SERPINC1P01008 464 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 CALCAP01258 141 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 LRG1P02750 347 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 PAEPP09466 180 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 VDRP11473 427 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 UCHL3P15374 230 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 HMGA1P17096 107 aaKnown RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 PTPN2P17706 415 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ATF6P18850 670 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 PBX1P40424 430 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ALDH1A3P47895 512 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 KCNQ1P51787 676 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ZNF132P52740 706 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 UBASH3AP57075 661 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 TPM4P67936 248 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 NTHL1P78549 312 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 MRPS5P82675 430 aaKnown RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SMAD4Q13485 552 aaKnown RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 DRAP1Q14919 205 aaPredicted RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 PTPN21Q16825 1174 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ARHGAP44Q17R89 818 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 MGAT5BQ3V5L5 792 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 FILIP1LQ4L180 1135 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ATAT1Q5SQI0 421 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SDHAF4Q5VUM1 108 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ARHGAP17Q68EM7 881 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 CES5AQ6NT32 575 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 TMEM270Q6UE05 265 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 VSTM1Q6UX27 236 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 GRASPQ7Z6J2 395 aaPredicted RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 DNAJB7Q7Z6W7 309 aaPredicted RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ZMIZ2Q8NF64 920 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SLC2A14Q8TDB8 520 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 GIPC2Q8TF65 315 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 TFAP2BQ92481 460 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SHC3Q92529 594 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SMG7Q92540 1137 aaKnown RBP7.86□□□□□ -1.15
LINC01049-201ENST00000426840 C8orf48Q96LL4 319 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ASB2Q96Q27 587 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 SMOQ99835 787 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ZSWIM1Q9BR11 485 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 STK33Q9BYT3 514 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ZNF518BQ9C0D4 1074 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 CSNK1G1Q9HCP0 422 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 FAM49BQ9NUQ9 324 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 HCFC1R1Q9NWW0 138 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 KIAA1257Q9ULG3 409 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 ASB3Q9Y575 518 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 FHOD1Q9Y613 1164 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 PTPRDP23468 1912 aa7.86□□□□□ -1.15
LINC01049-201ENST00000426840 C2orf16Q68DN1 1984 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 A0A1W2PQC6 194 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 HHLA1C9JL84 531 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 TNFRSF10BO14763 440 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 XYLBO75191 536 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 MOSPD3O75425 235 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 CCDC130P13994 396 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 IL9P15248 144 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 MTHFRP42898 656 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 EPHB3P54753 998 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 EPHA5P54756 1037 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 POLR2FP61218 127 aaKnown RBP7.85□□□□□ -1.15
LINC01049-201ENST00000426840 RPL10AP62906 217 aaKnown RBP7.85□□□□□ -1.15
LINC01049-201ENST00000426840 MTMR3Q13615 1198 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 CBX2Q14781 532 aaPredicted RBP7.85□□□□□ -1.15
LINC01049-201ENST00000426840 SMAD2Q15796 467 aaKnown RBP7.85□□□□□ -1.15
LINC01049-201ENST00000426840 CNGA2Q16280 664 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 AAK1Q2M2I8 961 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 C4orf17Q53FE4 359 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 SCN4BQ8IWT1 228 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 FAM71AQ8IYT1 594 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 TPCN2Q8NHX9 752 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 PSMG2Q969U7 264 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 SPATA17Q96L03 361 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 ZNF512Q96ME7 567 aaPredicted RBP7.85□□□□□ -1.15
LINC01049-201ENST00000426840 RIPOR3Q96MK2 946 aa7.85□□□□□ -1.15
LINC01049-201ENST00000426840 KCNK16Q96T55 309 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms