RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 DUS2Q9NX74 493 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 ZMYM5Q9UJ78 669 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 CPQQ9Y646 472 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 PRR23AA6NEV1 266 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 GABBR2O75899 941 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 TCF3P15923 654 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 GJA4P35212 333 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 STIM1Q13586 685 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 CCINQ13939 588 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 CCDC40Q4G0X9 1142 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 SNX30Q5VWJ9 437 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 RBM43Q6ZSC3 357 aaKnown RBP13.48□□□□□ -0.25
GPC1-204ENST00000426280 SCD5Q86SK9 330 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 TTC30AQ86WT1 665 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 SFTPA1Q8IWL2 248 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 NDRG1Q92597 394 aaKnown RBP13.48□□□□□ -0.25
GPC1-204ENST00000426280 NELL1Q92832 810 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 TMEM176AQ96HP8 235 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 IMPG2Q9BZV3 1241 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 ECT2Q9H8V3 914 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 MRPS17Q9Y2R5 130 aaKnown RBP13.48□□□□□ -0.25
GPC1-204ENST00000426280 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
GPC1-204ENST00000426280 MDM4O15151 490 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 CYP26A1O43174 497 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 LAMTOR5O43504 91 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 GFRA3O60609 400 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 EGFP01133 1207 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 ACO1P21399 889 aaKnown RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 SLC6A11P48066 632 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 APBA1Q02410 837 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 PAK1Q13153 545 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 CUL2Q13617 745 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 TMEM196Q5HYL7 178 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 ADGRG2Q8IZP9 1017 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 P2RY11Q96G91 374 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 SLITRK1Q96PX8 696 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 DUSP16Q9BY84 665 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
GPC1-204ENST00000426280 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
GPC1-204ENST00000426280 ATP8B3O60423 1300 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 A0A1W2PQH9 124 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 TRDMT1O14717 391 aaKnown RBP13.46□□□□□ -0.25
GPC1-204ENST00000426280 NCAM2O15394 837 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 STX10O60499 249 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 GREM1O60565 184 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 FAM200BP0CF97 657 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 OPRD1P41143 372 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 KIF11P52732 1056 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 PDGFRLQ15198 375 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 NFKBIBQ15653 356 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 RHBDF2Q6PJF5 856 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 UBA3Q8TBC4 463 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 METTL14Q9HCE5 456 aaKnown RBP13.46□□□□□ -0.25
GPC1-204ENST00000426280 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
GPC1-204ENST00000426280 K7ESF4 209 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 PPP1R2P41236 205 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 PPP3CCP48454 512 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 IFNAR2P48551 515 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 MARSP56192 900 aaKnown RBP13.45□□□□□ -0.26
GPC1-204ENST00000426280 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
GPC1-204ENST00000426280 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 FOXR2Q6PJQ5 311 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 BHLHA9Q7RTU4 235 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 PIGZQ86VD9 579 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 C12orf40Q86WS4 652 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 DCLK2Q8N568 766 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 MLKLQ8NB16 471 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 OVCA2Q8WZ82 227 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 NKD2Q969F2 451 aaPredicted RBP13.45□□□□□ -0.26
GPC1-204ENST00000426280 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
GPC1-204ENST00000426280 COMMD8Q9NX08 183 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 SCML2Q9UQR0 700 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 USP3Q9Y6I4 520 aa13.45□□□□□ -0.26
GPC1-204ENST00000426280 F5P12259 2224 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms